publication . Article . 2015

Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity

Adzzie-Shazleen eAzman; Iekhsan eOthman; Saraswati eS. Velu; Kok-Gan eChan; Learn-Han eLee;
Open Access English
  • Published: 01 Aug 2015 Journal: Frontiers in Microbiology, volume 6 (issn: 1664-302X, eissn: 1664-302X, Copyright policy)
  • Publisher: Frontiers Media S.A.
Abstract
Actinobacteria are one of the most important and efficient groups of natural metabolite producers. The genus Streptomyces have been recognized as prolific producers of useful natural compounds as they produced more than half of the naturally-occurring antibiotics isolated to-date and continue as the primary source of new bioactive compounds. Lately, Streptomyces groups isolated from different environments produced the same types of compound, possibly due to frequent genetic exchanges between species. As a result, there is a dramatic increase in demand to look for new compounds which have pharmacological properties from another group of Actinobacteria, known as r...
Subjects
mesheuropmc: complex mixturesbacteria
free text keywords: natural compounds, drug discovery, bioactivity, Review, Microbiology, rare actinobacteria, QR1-502, mangrove
154 references, page 1 of 11

Albuquerque L. França L. Rainey F. A. Schumann P. Nobre M. F. da Costa M. S. (2011). Gaiella occulta gen.nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiella les ord. nov. Syst. Appl. Microbiol. 34, 595–599. 10.1016/j.syapm.2011.07.001 21899973 [PubMed] [DOI]

Allen J. R. F. Holmstedt B. R. (1980). The simple β-carboline alkaloids. Phytochemistry 19, 1573–1582. 10.1016/S0031-9422(00)83773-5 [DOI]

Alongi D. M. (1988). Bacterial productivity and microbial biomass in tropical mangrove sediments. Microbial. Ecol. 15, 59–79. 10.1007/BF02012952 24202863 [PubMed] [DOI]

Andreote F. D. (2012). Metagenomics of mangrove. Encycl. Metag. 2014, 1–7. 10.1007/978-1-4614-6418-1_606-4 [OpenAIRE] [DOI]

Andreote F. D. Jiménez D. J. Chaves D. Dias A. C. F. Luvizotto D. M. Dini-Andreote F. . (2012). The microbiome of Brazilian mangrove sediments as revealed by metagenomics. PLoS ONE 7:e38600. 10.1371/journal.pone.0038600 22737213 [OpenAIRE] [PubMed] [DOI]

Ann M. H. Maria V. (2009). Micromonospora: an important microbe for biomedicine and potentially for biocontrol and biofuels. Soil Biol. Biochem. 42, 536–542. 10.1016/j.soilbio.2009.11.023 [DOI]

Ara I. Bakir M. A. Hozzein W. N. Kudo T. (2013). Population, morphological and chemotaxonomical characterization of diverse rare actinomycetes in the mangrove and medicinal plant rhizosphere. Afr. J. Microbiol. Res. 7, 1480–1488. 10.5897/AJMR12.452 [DOI]

Ara I. Kudo T. Matsumoto A. Takahashi Y. Omura S. (2007). Nonomuraea maheshkhaliensis sp. nov., a novel actinomycete isolated from mangrove rhizosphere mud. J. Gen. Appl. Microbiol. 53, 159–166. 10.2323/jgam.53.159 17726296 [PubMed] [DOI]

Ara I. Matsumoto A. Abdul Bakir M. Kudo T. Omura S. Takahashi Y. (2008). Actinomadura maheshkhaliensis sp. nov., a novel actinomycete isolated from mangrove rhizosphere soil of Maheshkhali, Bangladesh. J. Gen. Appl. Microbiol. 54, 335–342. 10.2323/jgam.54.335 19164876 [PubMed] [DOI]

Ara I. Paramaswari S. Vikineswary S. (2002). Diversity of Micromonospora in Malaysian mangrove rhizos phere soils. Malays. J. Sci. 21, 51–59.

Ashour M. A. Elkhayat E. S. Ebel R. Edrada R. Proksch P. (2007). Indole alkaloid from the red sea sponge Hyrtios erectus. Arkivoc 2007, 225–231. 10.3390/md11041061 [OpenAIRE] [DOI]

Atlas R. (1997). Principles of Microbiology. New York, NY: WCB McGrill-Hill.

Baltz R. H. (2006). Combinatorial biosynthesis of novel antibiotics and other secondary metabolites in actinomycetes. SIM News 56, 148–160.

Basak P. Pramanik A. Roy R. Chattopadhyay D. Bh attacharyya M. (2015). Cataloguing the bacterial diversity of the Sundarbans mangrove, India in the light of metagenomics. Genomics Data. 4, 90–92. 10.1016/j.gdata.2015.03.014 [OpenAIRE] [DOI]

Bérdy J. (2005). Bioactive microbial metabolites (review). J. Antibiot. 58, 1–26. 10.1038/ja.2005.1 15813176 [PubMed] [DOI]

154 references, page 1 of 11
Abstract
Actinobacteria are one of the most important and efficient groups of natural metabolite producers. The genus Streptomyces have been recognized as prolific producers of useful natural compounds as they produced more than half of the naturally-occurring antibiotics isolated to-date and continue as the primary source of new bioactive compounds. Lately, Streptomyces groups isolated from different environments produced the same types of compound, possibly due to frequent genetic exchanges between species. As a result, there is a dramatic increase in demand to look for new compounds which have pharmacological properties from another group of Actinobacteria, known as r...
Subjects
mesheuropmc: complex mixturesbacteria
free text keywords: natural compounds, drug discovery, bioactivity, Review, Microbiology, rare actinobacteria, QR1-502, mangrove
154 references, page 1 of 11

Albuquerque L. França L. Rainey F. A. Schumann P. Nobre M. F. da Costa M. S. (2011). Gaiella occulta gen.nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiella les ord. nov. Syst. Appl. Microbiol. 34, 595–599. 10.1016/j.syapm.2011.07.001 21899973 [PubMed] [DOI]

Allen J. R. F. Holmstedt B. R. (1980). The simple β-carboline alkaloids. Phytochemistry 19, 1573–1582. 10.1016/S0031-9422(00)83773-5 [DOI]

Alongi D. M. (1988). Bacterial productivity and microbial biomass in tropical mangrove sediments. Microbial. Ecol. 15, 59–79. 10.1007/BF02012952 24202863 [PubMed] [DOI]

Andreote F. D. (2012). Metagenomics of mangrove. Encycl. Metag. 2014, 1–7. 10.1007/978-1-4614-6418-1_606-4 [OpenAIRE] [DOI]

Andreote F. D. Jiménez D. J. Chaves D. Dias A. C. F. Luvizotto D. M. Dini-Andreote F. . (2012). The microbiome of Brazilian mangrove sediments as revealed by metagenomics. PLoS ONE 7:e38600. 10.1371/journal.pone.0038600 22737213 [OpenAIRE] [PubMed] [DOI]

Ann M. H. Maria V. (2009). Micromonospora: an important microbe for biomedicine and potentially for biocontrol and biofuels. Soil Biol. Biochem. 42, 536–542. 10.1016/j.soilbio.2009.11.023 [DOI]

Ara I. Bakir M. A. Hozzein W. N. Kudo T. (2013). Population, morphological and chemotaxonomical characterization of diverse rare actinomycetes in the mangrove and medicinal plant rhizosphere. Afr. J. Microbiol. Res. 7, 1480–1488. 10.5897/AJMR12.452 [DOI]

Ara I. Kudo T. Matsumoto A. Takahashi Y. Omura S. (2007). Nonomuraea maheshkhaliensis sp. nov., a novel actinomycete isolated from mangrove rhizosphere mud. J. Gen. Appl. Microbiol. 53, 159–166. 10.2323/jgam.53.159 17726296 [PubMed] [DOI]

Ara I. Matsumoto A. Abdul Bakir M. Kudo T. Omura S. Takahashi Y. (2008). Actinomadura maheshkhaliensis sp. nov., a novel actinomycete isolated from mangrove rhizosphere soil of Maheshkhali, Bangladesh. J. Gen. Appl. Microbiol. 54, 335–342. 10.2323/jgam.54.335 19164876 [PubMed] [DOI]

Ara I. Paramaswari S. Vikineswary S. (2002). Diversity of Micromonospora in Malaysian mangrove rhizos phere soils. Malays. J. Sci. 21, 51–59.

Ashour M. A. Elkhayat E. S. Ebel R. Edrada R. Proksch P. (2007). Indole alkaloid from the red sea sponge Hyrtios erectus. Arkivoc 2007, 225–231. 10.3390/md11041061 [OpenAIRE] [DOI]

Atlas R. (1997). Principles of Microbiology. New York, NY: WCB McGrill-Hill.

Baltz R. H. (2006). Combinatorial biosynthesis of novel antibiotics and other secondary metabolites in actinomycetes. SIM News 56, 148–160.

Basak P. Pramanik A. Roy R. Chattopadhyay D. Bh attacharyya M. (2015). Cataloguing the bacterial diversity of the Sundarbans mangrove, India in the light of metagenomics. Genomics Data. 4, 90–92. 10.1016/j.gdata.2015.03.014 [OpenAIRE] [DOI]

Bérdy J. (2005). Bioactive microbial metabolites (review). J. Antibiot. 58, 1–26. 10.1038/ja.2005.1 15813176 [PubMed] [DOI]

154 references, page 1 of 11
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publication . Article . 2015

Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity

Adzzie-Shazleen eAzman; Iekhsan eOthman; Saraswati eS. Velu; Kok-Gan eChan; Learn-Han eLee;