MetaboTools: A comprehensive toolbox for analysis of genome-scale metabolic models

Article, Preprint English OPEN
Maike Kathrin Aurich; Ronan Fleming; Ines Thiele;
(2016)
  • Publisher: Frontiers Media S.A.
  • Journal: Frontiers in Physiology,volume 7 (issn: 1664-042X, eissn: 1664-042X)
  • Related identifiers: doi: 10.3389/fphys.2016.00327, doi: 10.3389/fphys.2016.00327/full, pmc: PMC4971542
  • Subject: QP1-981 | protocol | model analysis | Metabolomics | Metabolic phenotypes | metabolic modeling | Quantitative Biology - Cell Behavior | Physiology | Quantitative Biology - Molecular Networks | Metabolism | constraint-based reconstruction and analysis (COBRA) | Protocols

Metabolomic data sets provide a direct read-out of cellular phenotypes and are increasingly generated to study biological questions. Previous work, by us and others, revealed the potential of analyzing extracellular metabolomic data in the context of the metabolic model... View more
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