FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

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Price, Morgan N.; Dehal, Paramvir S.; Arkin, Adam P.;
(2010)
  • Publisher: Public Library of Science
  • Journal: PLoS ONE,volume 5,issue 3 (eissn: 1932-6203)
  • Related identifiers: doi: 10.1371/journal.pone.0009490, pmc: PMC2835736
  • Subject: Research Article | Computational Biology/Macromolecular Sequence Analysis | Evolutionary Biology/Bioinformatics | Molecular Biology/Molecular Evolution

Background We recently described FastTree, a tool for inferring phylogenies for alignments with up to hundreds of thousands of sequences. Here, we describe improvements to FastTree that improve its accuracy without sacrificing scalability. Methodology/Principal Findings... View more
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