Fast characterization of segmental duplications in genome assemblies

Article, Preprint English OPEN
Numanagić, I.; Gökkaya, Alim S.; Zhang, L.; Berger, B.; Alkan, Can; Hach, F.;

Motivation Segmental duplications (SDs) or low-copy repeats, are segments of DNA > 1 Kbp with high sequence identity that are copied to other regions of the genome. SDs are among the most important sources of evolution, a common cause of genomic structural variation and... View more