publication . Article . 2018

Stripping Away the Soil: Plant Growth Promoting Microbiology Opportunities in Aquaponics

Bartelme, Ryan P.; Oyserman, Ben O.; Blom, Jesse E.; Sepulveda-Villet, Osvaldo J.; Newton, Ryan J.;
Open Access English
  • Published: 01 Jan 2018 Journal: Frontiers in Microbiology, volume 9 (eissn: 1664-302X, Copyright policy)
  • Publisher: Frontiers Media S.A.
Abstract
As the processes facilitated by plant growth promoting microorganisms (PGPMs) become better characterized, it is evident that PGPMs may be critical for successful sustainable agricultural practices. Microbes enrich plant growth through various mechanisms, such as enhancing resistance to disease and drought, producing beneficial molecules, and supplying nutrients and trace metals to the plant rhizosphere. Previous studies of PGPMs have focused primarily on soil-based crops. In contrast, aquaponics is a water-based agricultural system, in which production relies upon internal nutrient recycling to co-cultivate plants with fish. This arrangement has management bene...
Subjects
mesheuropmc: food and beverages
free text keywords: Recirculating aquaculture, Microbiology, Perspective, Plant growth promoting microorganisms, Journal Article, Aquaponics, international, Microbiome, Chlorosis, Rhizosphere
86 references, page 1 of 6

Akiyama, K., Matsuzaki, K., and Hayashi, H. (2005). Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435, 824-827. doi: 10.1038/nature03608

Andrews, S. C., Robinson, A. K., and Rodriguez-Quinones, F. (2003). Bacterial iron homeostasis. FEMS Microbiol. Rev. 27, 215-237. doi: 10.1016/S0168-6445(03) 00055-X

Barazani, O., and Baldwin, I. T. (2013). “A mixed bag: the plant growthpromoting Sebacina vermifera impairs defense mechanisms against herbivores,” in Piriformospora Indica, eds A. Varma, G. Kost, and R. Oelmüller (Berlin: Springer-Verlag), 251-261. doi: 10.1007/978-3-642-33802-1

Barton, L. L., Johnson, G. V., and Schito, K. (1996). Siderophore-mediated iron metabolism in growth and nitrogen fixation by alfalfa nodulated with Rhizobium meliloti. J. Plant Nutr. 19, 1201-1210. doi: 10.1080/ 01904169609365191

Beijerinck, M. (1888). Die bacterien der papilionaceenknoellchen. Bot. Zeitung 46, 725-804.

Biernbaum, J., Chapman, D., Lam, T., Lamendella, A., Sideman, E., and Welsch, S. (2016). National Organic Standards Board (NOSB) Hydroponic and Aquaponic Task Force Report. Available at: https://www.ams.usda.gov/sites/default/files/ media/2016%20Hydroponic%20Task%20Force%20Report.PDF

Bittsanszky, A., Uzinger, N., Gyulai, G., Mathis, A., Junge, R., Villarroel, M., et al. (2016). Nutrient supply of plants in aquaponic systems. Ecocycles 2, 17-20. doi: 10.19040/ecocycles.v2i2.57 [OpenAIRE]

Blancheton, J. P., Attramadal, K. J. K., Michaud, L., d'Orbcastel, E. R., and Vadstein, O. (2013). Insight into bacterial population in aquaculture systems and its implication. Aquac. Eng. 53, 30-39. doi: 10.1016/j.aquaeng.2012. 11.009

Blidariu, F., and Grozea, A. (2011). Increasing the economical efficiency and sustainability of indoor fish farming by means of aquaponics. Anim. Sci. Biotechnol. 44, 1-8. [OpenAIRE]

Boiteau, R., Hawco, N., Mende, D., McIlvin, M., Sedwick, P. N., Saito, M. A., et al. (2016). Siderophore-based adaptations to iron scarcity across major biomes of the eastern Pacific. Proc. Natl. Acad. Sci. U.S.A. 113, 14237-14242. doi: 10.1073/ pnas.1608594113 [OpenAIRE]

Brear, E. M., Day, D. A., and Smith, P. M. C. (2013). Iron: an essential micronutrient for the legume-rhizobium symbiosis. Front. Plant Sci. 4:359. doi: 10.3389/fpls. 2013.00359

Carini, P., Marsden, P. J., Leff, J. W., Morgan, E. E., Strickland, M. S., and Fierer, N. (2016). Relic DNA is abundant in soil and obscures estimates of soil microbial diversity. Nat. Microbiol. 2:16242. doi: 10.1038/nmicrobiol.2016.242

Coleman-Derr, D., and Tringe, S. G. (2014). Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance. Front. Microbiol. 5:283. doi: 10.3389/fmicb.2014.00283 [OpenAIRE]

da Silva Cerozi, B., and Fitzsimmons, K. (2016). Use of Bacillus spp. to enhance phosphorus availability and serve as a plant growth promoter in aquaponics systems. Sci. Hortic. 211, 277-282. doi: 10.1016/j.scienta.2016. 09.005

Danaher, J. J., Shultz, R. C., Rakocy, J. E., and Bailey, D. S. (2013). Alternative solids removal for warm water recirculating raft aquaponic systems. J. World Aquac. Soc. 44, 374-383. doi: 10.1111/jwas.12040

86 references, page 1 of 6
Abstract
As the processes facilitated by plant growth promoting microorganisms (PGPMs) become better characterized, it is evident that PGPMs may be critical for successful sustainable agricultural practices. Microbes enrich plant growth through various mechanisms, such as enhancing resistance to disease and drought, producing beneficial molecules, and supplying nutrients and trace metals to the plant rhizosphere. Previous studies of PGPMs have focused primarily on soil-based crops. In contrast, aquaponics is a water-based agricultural system, in which production relies upon internal nutrient recycling to co-cultivate plants with fish. This arrangement has management bene...
Subjects
mesheuropmc: food and beverages
free text keywords: Recirculating aquaculture, Microbiology, Perspective, Plant growth promoting microorganisms, Journal Article, Aquaponics, international, Microbiome, Chlorosis, Rhizosphere
86 references, page 1 of 6

Akiyama, K., Matsuzaki, K., and Hayashi, H. (2005). Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435, 824-827. doi: 10.1038/nature03608

Andrews, S. C., Robinson, A. K., and Rodriguez-Quinones, F. (2003). Bacterial iron homeostasis. FEMS Microbiol. Rev. 27, 215-237. doi: 10.1016/S0168-6445(03) 00055-X

Barazani, O., and Baldwin, I. T. (2013). “A mixed bag: the plant growthpromoting Sebacina vermifera impairs defense mechanisms against herbivores,” in Piriformospora Indica, eds A. Varma, G. Kost, and R. Oelmüller (Berlin: Springer-Verlag), 251-261. doi: 10.1007/978-3-642-33802-1

Barton, L. L., Johnson, G. V., and Schito, K. (1996). Siderophore-mediated iron metabolism in growth and nitrogen fixation by alfalfa nodulated with Rhizobium meliloti. J. Plant Nutr. 19, 1201-1210. doi: 10.1080/ 01904169609365191

Beijerinck, M. (1888). Die bacterien der papilionaceenknoellchen. Bot. Zeitung 46, 725-804.

Biernbaum, J., Chapman, D., Lam, T., Lamendella, A., Sideman, E., and Welsch, S. (2016). National Organic Standards Board (NOSB) Hydroponic and Aquaponic Task Force Report. Available at: https://www.ams.usda.gov/sites/default/files/ media/2016%20Hydroponic%20Task%20Force%20Report.PDF

Bittsanszky, A., Uzinger, N., Gyulai, G., Mathis, A., Junge, R., Villarroel, M., et al. (2016). Nutrient supply of plants in aquaponic systems. Ecocycles 2, 17-20. doi: 10.19040/ecocycles.v2i2.57 [OpenAIRE]

Blancheton, J. P., Attramadal, K. J. K., Michaud, L., d'Orbcastel, E. R., and Vadstein, O. (2013). Insight into bacterial population in aquaculture systems and its implication. Aquac. Eng. 53, 30-39. doi: 10.1016/j.aquaeng.2012. 11.009

Blidariu, F., and Grozea, A. (2011). Increasing the economical efficiency and sustainability of indoor fish farming by means of aquaponics. Anim. Sci. Biotechnol. 44, 1-8. [OpenAIRE]

Boiteau, R., Hawco, N., Mende, D., McIlvin, M., Sedwick, P. N., Saito, M. A., et al. (2016). Siderophore-based adaptations to iron scarcity across major biomes of the eastern Pacific. Proc. Natl. Acad. Sci. U.S.A. 113, 14237-14242. doi: 10.1073/ pnas.1608594113 [OpenAIRE]

Brear, E. M., Day, D. A., and Smith, P. M. C. (2013). Iron: an essential micronutrient for the legume-rhizobium symbiosis. Front. Plant Sci. 4:359. doi: 10.3389/fpls. 2013.00359

Carini, P., Marsden, P. J., Leff, J. W., Morgan, E. E., Strickland, M. S., and Fierer, N. (2016). Relic DNA is abundant in soil and obscures estimates of soil microbial diversity. Nat. Microbiol. 2:16242. doi: 10.1038/nmicrobiol.2016.242

Coleman-Derr, D., and Tringe, S. G. (2014). Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance. Front. Microbiol. 5:283. doi: 10.3389/fmicb.2014.00283 [OpenAIRE]

da Silva Cerozi, B., and Fitzsimmons, K. (2016). Use of Bacillus spp. to enhance phosphorus availability and serve as a plant growth promoter in aquaponics systems. Sci. Hortic. 211, 277-282. doi: 10.1016/j.scienta.2016. 09.005

Danaher, J. J., Shultz, R. C., Rakocy, J. E., and Bailey, D. S. (2013). Alternative solids removal for warm water recirculating raft aquaponic systems. J. World Aquac. Soc. 44, 374-383. doi: 10.1111/jwas.12040

86 references, page 1 of 6
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publication . Article . 2018

Stripping Away the Soil: Plant Growth Promoting Microbiology Opportunities in Aquaponics

Bartelme, Ryan P.; Oyserman, Ben O.; Blom, Jesse E.; Sepulveda-Villet, Osvaldo J.; Newton, Ryan J.;