Embryo Cell Membranes Reconstruction by Tensor Voting

Conference object English OPEN
Michelin , Gaël; Guignard , Léo; Fiuza , Ulla-Maj; Malandain , Grégoire;
  • Publisher: IEEE
  • Related identifiers: doi: 10.1109/ISBI.2014.6868105
  • Subject: image segmentation | surface detection | cell membrane | [ INFO.INFO-TI ] Computer Science [cs]/Image Processing | [INFO.INFO-TI]Computer Science [cs]/Image Processing | [INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV] | fluorescence microscopy

International audience; Image-based studies of developing organs or embryos produce a huge quantity of data. To handle such high-throughput experimental protocols, automated computer-assisted methods are highly desirable. This article aims at designing an efficient cell... View more
  • References (13)
    13 references, page 1 of 2

    [1] E Munro, F Robin, and P Lemaire, “Cellular morphogenesis in ascidians: how to shape a simple tadpole,” Curr Opin Genet Dev, vol. 16, no. 4, pp. 399-405, 2006.

    [2] J Traas and O Hamant, “From genes to shape: understanding the control of morphogenesis at the shoot meristem in higher plants using systems biology,” C R Biol, vol. 332, no. 11, pp. 974-85, 2009.

    [3] PJ Keller, “Imaging morphogenesis: technological advances and biological insights,” Science, vol. 340, no. 6137, pp. 1234168, 2013.

    [4] TV Truong and W Supatto, “Toward high-content/highthroughput imaging and analysis of embryonic morphogenesis,” Genesis, vol. 49, no. 7, pp. 555-69, 2011.

    [5] L Vincent and P Soille, “Watersheds in digital spaces: An efficient algorithm based on immersion simulations,” IEEE Trans Pattern Anal Mach Intell, vol. 13, no. 6, pp. 583-598, 1991.

    [6] R Fernandez, P Das, V Mirabet, E Moscardi, J Traas, JL Verdeil, G Malandain, and C Godin, “Imaging plant growth in 4-d: robust tissue reconstruction and lineaging at cell resolution,” Nat Meth, vol. 7, pp. 547-553, 2010.

    [7] KR Mosaliganti, RR Noche, F Xiong, IA Swinburne, and SG Megason, “Acme: automated cell morphology extractor for comprehensive reconstruction of cell membranes,” PLoS Comput Biol, vol. 8, no. 12, 2012.

    [8] G Medioni, MS Lee, and CK Tang, Computational Framework for Segmentation and Grouping, Elsevier Science Inc., New York, NY, USA, 2000.

    [9] C Lorenz, IC Carlsen, TM Buzug, C Fassnacht, and J Weese, “Multi-scale line segmentation with automatic estimation of width, contrast and tangential direction in 2D and 3D medical images,” in CVRMed-MRCAS'97. 1997, number 1205 in LNCS, pp. 233-242, Springer.

    [10] AF Frangi, WJ Niessen, KL Vincken, and MA Viergever, “Multiscale vessel enhancement filtering,” in MICCAI'98. 1998, vol. 1496 of LNCS, pp. 130-137, Springer.

  • Metrics
Share - Bookmark