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Other research product . InteractiveResource . 2020

naturalistic-data-analysis/naturalistic_data_analysis: Version 1.0

Luke Chang; Jeremy Manning; Christopher Baldassano; Alejandro de la Vega; Gordon Fleetwood; Linda Geerligs; James Haxby; +8 Authors
Open Access   English  
Published: 09 Jul 2020
Publisher: Zenodo
Version 1.0 of the educational course. is an open access online educational resource that provides an introduction to analyzing naturalistic functional neuroimaging datasets using Python. is built using Jupyter-Book and provides interactive tutorials for introducing advanced analytic techniques . This includes functional alignment, inter-subject correlations, inter-subject representational similarity analysis, inter-subject functional connectivity, event segmentation, natural language processing, hidden semi-markov models, automated annotation extraction, and visualizing high dimensional data. The tutorials focus on practical applications using open access data, short open access video lectures, and interactive Jupyter notebooks. All of the tutorials use open source packages from the python scientific computing community (e.g., numpy, pandas, scipy, matplotlib, scikit-learn, networkx, nibabel, nilearn, brainiak, hypertoos, timecorr, pliers, statesegmentation, and nltools). The course is designed to be useful for varying levels of experience, including individuals with minimal experience with programming, Python, and statistics.

neuroimaging, analysis, fmri, naturalistic, data

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