A RESTful API for Accessing Microbial Community Data for MG-RAST

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Wilke, Andreas; Bischof, Jared; Harrison, Travis; Brettin, Tom; D'Souza, Mark; Gerlach, Wolfgang; Matthews, Hunter; Paczian, Tobias; Wilkening, Jared; M. Glass, Elizabeth; Desai, Narayan; Meyer, Folker;
  • Publisher: Figshare
  • Related identifiers: doi: 10.1371/journal.pcbi.1004008
  • Subject: Biochemistry | Genetics | Biotechnology | Ecology | Inorganic Chemistry | MG-RAST data | web services API | Representational State Transfer | analysis tools | Accessing Microbial Community Data | MG-RAST Metagenomic sequencing | DOE Systems Biology Knowledgebase project | quality control results | JSON | RESTful API | MG-RAST web interface | web-based analysis tools | application programmers interface
    • FOR: 69999 Biological Sciences not elsewhere classified | 80699 Information Systems not elsewhere classified

<div><p>Metagenomic sequencing has produced significant amounts of data in recent years. For example, as of summer 2013, MG-RAST has been used to annotate over 110,000 data sets totaling over 43 Terabases. With metagenomic sequencing finding even wider adoption in the s... View more
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