research product . Other ORP type . 2017

The Interaction between Nidovirales and Autophagy Components

Cong, Yingying; Verlhac, Pauline; Reggiori, Fulvio;
Open Access English
  • Published: 11 Jul 2017
  • Country: Netherlands
Abstract
Autophagy is a conserved intracellular catabolic pathway that allows cells to maintain homeostasis through the degradation of deleterious components via specialized double-membrane vesicles called autophagosomes. During the past decades, it has been revealed that numerous pathogens, including viruses, usurp autophagy in order to promote their propagation. Nidovirales are an order of enveloped viruses with large single-stranded positive RNA genomes. Four virus families (Arterividae, Coronaviridae, Mesoniviridae, and Roniviridae) are part of this order, which comprises several human and animal pathogens of medical and veterinary importance. In host cells, Nidovirales induce membrane rearrangements including autophagosome formation. The relevance and putative mechanism of autophagy usurpation, however, remain largely elusive. Here, we review the current knowledge about the possible interplay between Nidovirales and autophagy.
Subjects
free text keywords: coronavirus, arterivirus, mesonivirus, ronivirus, autophagosome, autophagic flux, infection, replication, egression, RESPIRATORY-SYNDROME-VIRUS, TRANSMISSIBLE GASTROENTERITIS VIRUS, CORONAVIRUS REPLICATION COMPLEX, ENDOPLASMIC-RETICULUM STRESS, DOUBLE-MEMBRANE VESICLES, EQUINE ARTERITIS VIRUS, VIRAL REPLICATION, ATG PROTEINS, PRRSV INFECTION, ERAD REGULATORS
Related Organizations
Communities
Communities with gateway
OpenAIRE Connect image
Funded by
EC| PRONKJEWAIL
Project
PRONKJEWAIL
Protecting patients with enhanced susceptibility to infections
  • Funder: European Commission (EC)
  • Project Code: 713660
  • Funding stream: H2020 | MSCA-COFUND-DP
, SNSF| ER-phagy mechanisms to maintain and restore endoplasmic reticulum homeostasis
Project
ER-phagy mechanisms to maintain and restore endoplasmic reticulum homeostasis
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: CRSII3_154421
  • Funding stream: Programmes | Sinergia
, NWO| A three-dimensional look into autophagy
Project
A three-dimensional look into autophagy
  • Funder: Netherlands Organisation for Scientific Research (NWO) (NWO)
  • Project Code: 2300175771
Download from
Open Access
NARCIS
Other ORP type . 2017
Providers: NARCIS
97 references, page 1 of 7

1. Gorbalenya, A.E.; Enjuanes, L.; Ziebuhr, J.; Snijder, E.J. Nidovirales: Evolving the largest RNA virus genome. Virus Res. 2006, 117, 17-37. [CrossRef] [PubMed] [OpenAIRE]

2. Revision of the taxonomy of the Coronavirus, Torovirus and Arterivirus genera. Arch Virol. 1994, 135, 227-237.

3. Lai, M.M.; Cavanagh, D. The molecular biology of coronaviruses. Adv. Virus Res. 1997, 48, 1-100. [PubMed]

4. De Groot, R.J.; Baker, S.C.; Baric, R.; Enjuanes, L.; Gorbalenya, A.E.; Holmes, K.V.; Perlman, S.; Poon, L.; Rottier, P.J.M.; Talbot, P.J. Coronaviridae. In Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses; Elsevier Academic Press: San Diego, CA, USA, 2012; pp. 774-796.

5. Pasternak, A.O.; Spaan, W.J.; Snijder, E.J. Nidovirus transcription: How to make sense...? J. Gen. Virol. 2006, 87, 1403-1421. [CrossRef] [PubMed]

6. Siddell, S.G. The Coronaviridae. In The Coronaviridae; Springer: New York, NY, USA, 1995; pp. 1-10.

7. McCluskey, B.J.; Haley, C.; Rovira, A.; Main, R.; Zhang, Y.; Barder, S. Retrospective testing and case series study of porcine delta coronavirus in US swine herds. Prev. Vet. Med. 2016, 123, 185-191. [CrossRef] [PubMed]

8. Cong, Y.; Ren, X. Coronavirus entry and release in polarized epithelial cells: A review. Rev. Med. Virol. 2014, 24, 308-315. [CrossRef] [PubMed]

9. De Vries, A.A.F.; Horzinek, M.C.; Rottier, P.J.M.; De Groot, R.J. The Genome Organization of the Nidovirales: Similarities and Differences Between Arteri-, Toro-, and Coronaviruses; Seminars in VIROLOGY; Elsevier: Lincoln, UK, 1997; pp. 33-47.

10. Cong, Y.; Zarlenga, D.S.; Richt, J.A.; Wang, X.; Wang, Y.; Suo, S.; Wang, J.; Ren, Y.; Ren, X. Evolution and homologous recombination of the hemagglutinin-esterase gene sequences from porcine torovirus. Virus Genes 2013, 47, 66-74. [CrossRef] [PubMed] [OpenAIRE]

11. Vasilakis, N.; Guzman, H.; Firth, C.; Forrester, N.L.; Widen, S.G.; Wood, T.G.; Rossi, S.L.; Ghedin, E.; Popov, V.; Blasdell, K.R.; et al. Mesoniviruses are mosquito-specific viruses with extensive geographic distribution and host range. Virol. J. 2014, 11, 97. [CrossRef] [PubMed]

12. Zirkel, F.; Roth, H.; Kurth, A.; Drosten, C.; Ziebuhr, J.; Junglen, S. Identification and characterization of genetically divergent members of the newly established family Mesoniviridae. J. Virol. 2013, 87, 6346-6358. [CrossRef] [PubMed] [OpenAIRE]

13. Zirkel, F.; Kurth, A.; Quan, P.L.; Briese, T.; Ellerbrok, H.; Pauli, G.; Leendertz, F.H.; Lipkin, W.I.; Ziebuhr, J.; Drosten, C.; et al. An insect nidovirus emerging from a primary tropical rainforest. mBio 2011, 2, e00077-11. [CrossRef] [PubMed]

14. Dong, X.; Liu, S.; Zhu, L.; Wan, X.; Liu, Q.; Qiu, L.; Zou, P.; Zhang, Q.; Huang, J. Complete genome sequence of an isolate of a novel genotype of yellow head virus from Fenneropenaeus chinensis indigenous in China. Arch Virol. 2017, 162, 1149-1152. [CrossRef] [PubMed]

15. Prather, R.S.; Whitworth, K.M.; Schommer, S.K.; Wells, K.D. Genetic engineering alveolar macrophages for host resistance to PRRSV. Vet. Microbiol. 2017, 16, S0378-1135. [CrossRef] [PubMed]

97 references, page 1 of 7
2 research outcomes, page 1 of 1
Abstract
Autophagy is a conserved intracellular catabolic pathway that allows cells to maintain homeostasis through the degradation of deleterious components via specialized double-membrane vesicles called autophagosomes. During the past decades, it has been revealed that numerous pathogens, including viruses, usurp autophagy in order to promote their propagation. Nidovirales are an order of enveloped viruses with large single-stranded positive RNA genomes. Four virus families (Arterividae, Coronaviridae, Mesoniviridae, and Roniviridae) are part of this order, which comprises several human and animal pathogens of medical and veterinary importance. In host cells, Nidovirales induce membrane rearrangements including autophagosome formation. The relevance and putative mechanism of autophagy usurpation, however, remain largely elusive. Here, we review the current knowledge about the possible interplay between Nidovirales and autophagy.
Subjects
free text keywords: coronavirus, arterivirus, mesonivirus, ronivirus, autophagosome, autophagic flux, infection, replication, egression, RESPIRATORY-SYNDROME-VIRUS, TRANSMISSIBLE GASTROENTERITIS VIRUS, CORONAVIRUS REPLICATION COMPLEX, ENDOPLASMIC-RETICULUM STRESS, DOUBLE-MEMBRANE VESICLES, EQUINE ARTERITIS VIRUS, VIRAL REPLICATION, ATG PROTEINS, PRRSV INFECTION, ERAD REGULATORS
Related Organizations
Communities
Communities with gateway
OpenAIRE Connect image
Funded by
EC| PRONKJEWAIL
Project
PRONKJEWAIL
Protecting patients with enhanced susceptibility to infections
  • Funder: European Commission (EC)
  • Project Code: 713660
  • Funding stream: H2020 | MSCA-COFUND-DP
, SNSF| ER-phagy mechanisms to maintain and restore endoplasmic reticulum homeostasis
Project
ER-phagy mechanisms to maintain and restore endoplasmic reticulum homeostasis
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: CRSII3_154421
  • Funding stream: Programmes | Sinergia
, NWO| A three-dimensional look into autophagy
Project
A three-dimensional look into autophagy
  • Funder: Netherlands Organisation for Scientific Research (NWO) (NWO)
  • Project Code: 2300175771
Download from
Open Access
NARCIS
Other ORP type . 2017
Providers: NARCIS
97 references, page 1 of 7

1. Gorbalenya, A.E.; Enjuanes, L.; Ziebuhr, J.; Snijder, E.J. Nidovirales: Evolving the largest RNA virus genome. Virus Res. 2006, 117, 17-37. [CrossRef] [PubMed] [OpenAIRE]

2. Revision of the taxonomy of the Coronavirus, Torovirus and Arterivirus genera. Arch Virol. 1994, 135, 227-237.

3. Lai, M.M.; Cavanagh, D. The molecular biology of coronaviruses. Adv. Virus Res. 1997, 48, 1-100. [PubMed]

4. De Groot, R.J.; Baker, S.C.; Baric, R.; Enjuanes, L.; Gorbalenya, A.E.; Holmes, K.V.; Perlman, S.; Poon, L.; Rottier, P.J.M.; Talbot, P.J. Coronaviridae. In Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses; Elsevier Academic Press: San Diego, CA, USA, 2012; pp. 774-796.

5. Pasternak, A.O.; Spaan, W.J.; Snijder, E.J. Nidovirus transcription: How to make sense...? J. Gen. Virol. 2006, 87, 1403-1421. [CrossRef] [PubMed]

6. Siddell, S.G. The Coronaviridae. In The Coronaviridae; Springer: New York, NY, USA, 1995; pp. 1-10.

7. McCluskey, B.J.; Haley, C.; Rovira, A.; Main, R.; Zhang, Y.; Barder, S. Retrospective testing and case series study of porcine delta coronavirus in US swine herds. Prev. Vet. Med. 2016, 123, 185-191. [CrossRef] [PubMed]

8. Cong, Y.; Ren, X. Coronavirus entry and release in polarized epithelial cells: A review. Rev. Med. Virol. 2014, 24, 308-315. [CrossRef] [PubMed]

9. De Vries, A.A.F.; Horzinek, M.C.; Rottier, P.J.M.; De Groot, R.J. The Genome Organization of the Nidovirales: Similarities and Differences Between Arteri-, Toro-, and Coronaviruses; Seminars in VIROLOGY; Elsevier: Lincoln, UK, 1997; pp. 33-47.

10. Cong, Y.; Zarlenga, D.S.; Richt, J.A.; Wang, X.; Wang, Y.; Suo, S.; Wang, J.; Ren, Y.; Ren, X. Evolution and homologous recombination of the hemagglutinin-esterase gene sequences from porcine torovirus. Virus Genes 2013, 47, 66-74. [CrossRef] [PubMed] [OpenAIRE]

11. Vasilakis, N.; Guzman, H.; Firth, C.; Forrester, N.L.; Widen, S.G.; Wood, T.G.; Rossi, S.L.; Ghedin, E.; Popov, V.; Blasdell, K.R.; et al. Mesoniviruses are mosquito-specific viruses with extensive geographic distribution and host range. Virol. J. 2014, 11, 97. [CrossRef] [PubMed]

12. Zirkel, F.; Roth, H.; Kurth, A.; Drosten, C.; Ziebuhr, J.; Junglen, S. Identification and characterization of genetically divergent members of the newly established family Mesoniviridae. J. Virol. 2013, 87, 6346-6358. [CrossRef] [PubMed] [OpenAIRE]

13. Zirkel, F.; Kurth, A.; Quan, P.L.; Briese, T.; Ellerbrok, H.; Pauli, G.; Leendertz, F.H.; Lipkin, W.I.; Ziebuhr, J.; Drosten, C.; et al. An insect nidovirus emerging from a primary tropical rainforest. mBio 2011, 2, e00077-11. [CrossRef] [PubMed]

14. Dong, X.; Liu, S.; Zhu, L.; Wan, X.; Liu, Q.; Qiu, L.; Zou, P.; Zhang, Q.; Huang, J. Complete genome sequence of an isolate of a novel genotype of yellow head virus from Fenneropenaeus chinensis indigenous in China. Arch Virol. 2017, 162, 1149-1152. [CrossRef] [PubMed]

15. Prather, R.S.; Whitworth, K.M.; Schommer, S.K.; Wells, K.D. Genetic engineering alveolar macrophages for host resistance to PRRSV. Vet. Microbiol. 2017, 16, S0378-1135. [CrossRef] [PubMed]

97 references, page 1 of 7
2 research outcomes, page 1 of 1
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