ARBTools is a Python library containing a Lekien-Marsden type tricubic spline method for interpolating three-dimensional scalar or vector fields presented as a set of discrete data points on a regular cuboid grid. ARBTools was developed for simulations of magnetic molec...

HELMpy is an open source software for power flow solution developed on Python 3. Specifically, two algorithms for power flow solution are implemented in this software: a Holomorphic Embedding Load-flow Method (HELM), and a Newton-Raphson (NR) based power flow method, us...

Mediation refers to the effect transmitted by mediators that intervene in the relationship between an exposure and a response variable. Mediation analysis has been broadly studied in many fields. However, it remains a challenge for researchers to consider complicated as...

Smurf is an open source modular system developed in Python for running and cycling data assimilation (DA) systems. It is organised around three super classes for numerical model management, assimilation schemes and observation instruments. Any new item can be easily plu...

We describe the Bivalent Shape Task (BST), software using the Psychology Experiment Building Language (PEBL), for testing of cognitive interference and the ability to suppress interference. The test is available via the GNU Public License, Version 3 (GPLv3), is freely m...

EIT-MESHER ( https://github.com/EIT-team/Mesher ) is C++ software, based on the CGAL library, which generates high quality Finite Element Model tetrahedral meshes from binary masks of 3D volume segmentations. Originally developed for biomedical applications in Electrica...

We present Glyph - a Python package for genetic programming based symbolic regression. Glyph is designed for usage let by numerical simulations let by real world experiments. For experimentalists, glyph-remote provides a separation of tasks: a ZeroMQ interface splits th...

The Particle Tracking Velocimetry (PTV) community employs several formats of particle information such as position and velocity as function of time, i.e. trajectory data, as a result of diverging needs unmet by existing formats, and a number of different, mostly home-gr...

SOMAscan™ is a complex proteomic platform created by SomaLogic. Experimental data resulting from the assay is provided by SomaLogic in a proprietary text-based format called ADAT. This manuscript describes a user-friendly point and click open source, platform-independen...

The Python package fluidsim is introduced in this article as an extensible framework for Computational Fluid Mechanics (CFD) solvers. It is developed as a part of FluidDyn project [2], an effort to promote open-source and open-science collaboration within fluid mechanic...