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169 research outcomes, page 1 of 17
  • publication . Other literature type . Preprint . 2019
    Open Access
    Authors:
    Eli Levy Karin; Milot Mirdita; Johannes Söding;
    Publisher: bioRxiv
    Project: TARA | Tara Oceans (2), EC | Virus-X (685778)

    <jats:title>Abstract</jats:title><jats:sec><jats:title>Background</jats:title><jats:p>Metagenomics is revolutionizing the study of microorganisms and their involvement in biological, biomedical, and geochemical processes, allowing us to investigate by direct sequencing ...

  • publication . Article . 2011
    Open Access
    Authors:
    Lynn Schriml; George M Garrity; Folker Meyer; Guy Cochrane; Peter Sterk; Peter Dawyndt; Rob Knight; David Ussery; Nikos Kyrpides;
    Publisher: eScholarship, University of California
    Project: WT , NSF | RCN for Genomic and Metag... (0840989), TARA | Tara Oceans (2)

    A vast and rich body of information has grown up as a result of the world's enthusiasm for 'omics technologies. Finding ways to describe and make available this information that maximise its usefulness has become a major effort across the 'omics world. At the heart of t...

  • publication . Master thesis . 2016
    Open Access English
    Authors:
    Fagerli, Jarl;
    Publisher: UiT Norges arktiske universitet
    Project: TARA | Tara Oceans (2)

    In light of recent years’ exploding data generation in life sciences, increasing downstream analysis capabilities is paramount to address the asymmetry of innovation in data creation contra processing capacities. Many contemporaneously used tools are sequential programs...

  • publication . Article . 2010
    Open Access Greek, Modern (1453-)
    Authors:
    NoValue;
    Publisher: Εθνικό Κέντρο Τεκμηρίωσης = National Documentation Centre
    Project: TARA | Tara Oceans (2)

    36 σ.: εικ., πίνακες Σεπτέμβριος - Οκτώβριος 2009

  • publication . Doctoral thesis . 2017
    Open Access French
    Authors:
    Mariette , Jérôme ,;
    Publisher: HAL CCSD
    Project: TARA | Tara Oceans (2)

    The development of high-throughput sequencing technologies has lead to produce high dimensional heterogeneous datasets at different living scales. To process such data, integrative methods have been shown to be relevant, but still remain challenging. This thesis gathers...

  • publication . Doctoral thesis . 2016
    Open Access French
    Authors:
    Mayot, Nicolas;
    Publisher: HAL CCSD
    Project: TARA | Tara Oceans (2)

    The phytoplankton are essential for the oceanic trophic webs and for biogeochemical cycles on Earth. However, uncertainties remain about the environmental factors influencing its seasonality, and its growing efficiency. The main objective of this thesis is to characteri...

  • publication . Preprint . 2020
    Open Access
    Authors:
    Royalty, Taylor M.; Steen, Andrew D.;
    Publisher: Cold Spring Harbor Laboratory
    Project: TARA | Tara Oceans (2)

    <jats:title>Abstract</jats:title><jats:p>Although functional redundancy has received increased attention in the microbial ecology literature, no quantitative functional redundancy measurement is currently available which compares multiple communities and integrates of ‘...

  • publication . Article . Other literature type . 2017
    Open Access English
    Authors:
    Robert Edwards; Gustavo Gregoracci; Felipe Coutinho; Bas E. Dutilh;
    Project: TARA | Tara Oceans (2)

    The understanding of marine virus diversity and function is in its infancy. Here, Coutinho et al. assemble a data set of new viral contigs and use co-occurrence analyses to identify the putative hosts, elucidate infection strategies and viral strategies for exploiting t...

  • publication . Preprint . 2019
    Open Access English
    Authors:
    Laso-Jadart, Romuald; Sugier, Kevin; Petit, Emmanuelle; Labadie, Karine; Peterlongo, Pierre; Ambroise, Christophe; Wincker, Patrick; JAMET, Jean-Louis; Madoui, Mohammed-Amin;
    Publisher: HAL CCSD
    Project: TARA | Tara Oceans (2)

    <jats:title>Abstract</jats:title><jats:p>Allele-specific expression (ASE) is a widely studied molecular mechanism at cell, tissue and organism levels. Here, we extrapolated the concept of ASE to the population-scale (psASE), aggregating ASEs detected at smaller scales. ...

  • publication . Preprint . 2019
    Open Access English
    Authors:
    A. Viehweger; S. Krautwurst; D. H. Parks; B. König; M. Marz;
    Publisher: Cold Spring Harbor Laboratory
    Project: TARA | Tara Oceans (2)

    <jats:title>Abstract</jats:title><jats:p>An ever-growing number of metagenomes can be used for biomining and the study of microbial functions. The use of learning algorithms in this context has been hindered, because they often need input in the form of low-dimensional,...

169 research outcomes, page 1 of 17
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