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13 research outcomes, page 1 of 2
  • publication . Article . Preprint . 2020
    Open Access English
    Authors:
    Taghvaei, Amirhossein; Georgiou, Tryphon T.; Norton, Larry; Tannenbaum, Allen R;
    Publisher: Cold Spring Harbor Laboratory
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43)

    <jats:p>The purpose of this work is to make a case for epidemiological models with fractional exponent in the contribution of sub-populations to the transmission rate. More specifically, we question the standard assumption in the literature on epidemiological models, wh...

  • publication . Preprint . 2019
    Open Access
    Authors:
    Maryam Pouryahya;
    Publisher: Cold Spring Harbor Laboratory
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43)

    <jats:title>Abstract</jats:title><jats:p>The remarkable growth of multi-platform genomic profiles has led to the multiomics data integration challenge. The effective integration of such data provides a comprehensive view of the molecular complexity of cancer tumors and ...

  • publication . Other literature type . Preprint . 2019
    Open Access
    Authors:
    Maryam Pouryahya; Jung Hun Oh; James C. Mathews; Zehor Belkhatir; Caroline Moosmüller; Joseph O. Deasy; Allen R. Tannenbaum;
    Publisher: bioRxiv
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43)

    <jats:title>Abstract</jats:title><jats:p>The study of large-scale pharmacogenomics provides an unprecedented opportunity to develop computational models that can accurately predict large cohorts of cell lines and drugs. In this work, we present a novel method for predic...

  • publication . Preprint . Article . Other literature type . 2019
    Open Access
    Authors:
    Farooq, Hamza; Chen, Yongxin; Georgiou, Tryphon T.; Tannenbaum, Allen; Lenglet, Christophe;
    Publisher: Cold Spring Harbor Laboratory
    Project: NIH | Neuroimaging Analysis Cen... (5P41EB015902-20), NIH | MOUSE GENETICS (2P30CA008748-43), NIH | NMR Imaging and Spectrosc... (4P41EB015894-24), NIH | Center for Functional Ima... (5P41EB015896-18), NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | The Human Connectome Proj... (5U01MH093765-02), NIH | Core 3 - Institutional Ce... (5P30NS076408-02), NIH | Mapping the Human Connect... (3U54MH091657-03S1), NIH | FUNCTIONAL MRI INFORMATIC... (5P41RR013218-09), NSF | Theory and Techniques for... (1509387),...

    Although brain functionality is often remarkably robust to lesions and other insults, it may be fragile when these take place in specific locations. Previous attempts to quantify robustness and fragility sought to understand how the functional connectivity of brain netw...

  • publication . Preprint . Article . Other literature type . 2019
    Open Access English
    Authors:
    James C. Mathews; Maryam Pouryahya; Caroline Moosmüller; Yannis G. Kevrekidis; Joseph O. Deasy; Allen Tannenbaum;
    Publisher: Cold Spring Harbor Laboratory
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43)

    <jats:title>Abstract</jats:title> <jats:p>Many biological datasets are high-dimensional yet manifest an underlying order. In this paper, we describe an unsupervised data analysis methodology that operates in the setting of a multivariate dataset and a network which expr...

  • publication . Other literature type . Preprint . 2019
    Open Access
    Authors:
    Zehor Belkhatir; Aditi Iyer; James C. Mathews; Maryam Pouryahya; Saad Nadeem; Joseph O. Deasy; Aditya P. Apte; Allen R. Tannenbaum;
    Publisher: bioRxiv
    Project: NIH | MOUSE GENETICS (2P30CA008748-43), NIH | Glymphatic function in a ... (5R01AG048769-04)

    <jats:title>Abstract</jats:title><jats:p>The emerging field of radiomics, which consists of transforming standard-of-care images to quantifiable scalar statistics, endeavors to reveal the information hidden in these macroscopic images. This field of research has found d...

  • publication . Preprint . 2019
    Open Access English
    Authors:
    Chen, Yongxin; Georgiou, Tryphon T.; Tannenbaum, Allen R.;
    Project: NSF | EAGER: Real-Time: Search ... (1839441), NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43), NIH | Dose-distribution radiomi... (5R01CA198121-02), NSF | Collaborative Research: D... (1807664)

    Comment: 6 pages, 6 figures

  • publication . Preprint . 2020
    Open Access English
    Authors:
    Zhu, Jiening; Elkin, Rena; Oh, Jung Hun; Deasy, Joseph O.; Tannenbaum, Allen;
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43)

    Unbalanced optimal mass transport (OMT) seeks to remove the conservation of mass constraint by adding a source term to the standard continuity equation in the Benamou-Brenier formulation of OMT. In this note, we show how the addition of the source fits into the vector-v...

  • publication . Preprint . 2020
    Open Access English
    Authors:
    Nadeem, Saad; Hollmann, Travis; Tannenbaum, Allen;
    Project: NIH | MOUSE GENETICS (2P30CA008748-43), NIH | Glymphatic function in a ... (5R01AG048769-04)

    Variations in hematoxylin and eosin (H&E) stained images (due to clinical lab protocols, scanners, etc) directly impact the quality and accuracy of clinical diagnosis, and hence it is important to control for these variations for a reliable diagnosis. In this work, we p...

  • publication . Preprint . 2019
    Open Access English
    Authors:
    Elkin, Rena; Nadeem, Saad; Lee, Hedok; Benveniste, Helene; Tannenbaum, Allen;
    Project: NIH | Glymphatic function in a ... (5R01AG048769-04), NIH | MOUSE GENETICS (2P30CA008748-43), NIH | Dose-distribution radiomi... (5R01CA198121-02)

    Comment: To appear in MICCAI 2020

13 research outcomes, page 1 of 2
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