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49 research outcomes, page 1 of 5
  • publication . Other literature type . Article . 2013
    Open Access
    Authors:
    Manolis Maragkakis; Nikos Kostoulas; Martin Reczko; Georgios Georgakilas; Theodore Dalamagas; Maria D. Paraskevopoulou; Artemis G. Hatzigeorgiou;
    Persistent Identifiers
    Publisher: Oxford University Press (OUP)

    Recently, the attention of the research community has been focused on long non-coding RNAs (lncRNAs) and their physiological/pathological implications. As the number of experiments increase in a rapid rate and transcriptional units are better annotated, databases indexi...

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  • publication . Article . 2010
    Open Access English
    Authors:
    Dimitris Antoniou; George P. Patrinos; Emanuel F. Iii. Petricoin; Marianthi Georgitsi; Giannis Tzimas; Emmanouil Viennas; Vassiliki Gkantouna; Konstantinos Poulas; Sjozef van Baal;
    Persistent Identifiers
    Publisher: OXFORD UNIV PRESS
    Project: EC | GEN2PHEN (200754)

    textabstractFrequency of INherited Disorders database (FIND base; http://www.findbase. org) records frequencies of causative genetic variations worldwide. Database records include the population and ethnic group or geographical region, the disorder name and the related ...

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  • publication . Article . 2016
    Open Access
    Authors:
    Nikos Minadakis; Nikitas Michalakis; Christos Arvanitidis; Eva Chatzinikolaou; George Perantinos; Sarah Faulwetter; Kleoniki Keklikoglou; Emmanouela Panteri; Irene Filiopoulou; Alexandros Gougousis;
    Persistent Identifiers
    Publisher: Pensoft Publishers
    Project: EC | MARBIGEN (264089), EC | SYNTHESYS3 (312253)

    Abstract Background During recent years, X-ray microtomography (micro-CT) has seen an increasing use in biological research areas, such as functional morphology, taxonomy, evolutionary biology and developmental research. Micro-CT is a technology which uses X-rays to cre...

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  • publication . Article . 2014
    Open Access
    Authors:
    Pantelis Hatzis; Panagiotis Moulos;
    Persistent Identifiers

    RNA-Seq is gradually becoming the standard tool for transcriptomic expression studies in biological research. Although considerable progress has been recorded in the development of statistical algorithms for the detection of differentially expressed genes using RNA-Seq ...

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  • publication . Article . 2017
    Open Access
    Authors:
    Spiros Skiadopoulos; Thanasis Vergoulis; Theodore Dalamagas; Ioannis S. Vlachos; Ioannis S. Vlachos; Konstantinos Zagganas; Maria D. Paraskevopoulou; Maria D. Paraskevopoulou;
    Persistent Identifiers
    Publisher: Springer Nature
    Project: EC | ELIXIR-EXCELERATE (676559)

    Abstract Background A group of miRNAs can regulate a biological process by targeting genes involved in the process. The unbiased miRNA functional enrichment analysis is the most precise in silico approach to predict the biological processes that may be regulated by a gi...

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  • publication . Article . 2010
    Open Access
    Authors:
    Konstantinos D. Tsirigos; Pantelis G. Bagos; Stavros J. Hamodrakas;
    Persistent Identifiers

    We describe here OMPdb, which is currently the most complete and comprehensive collection of integral β-barrel outer membrane proteins from Gram-negative bacteria. The database currently contains 69,354 proteins, which are classified into 85 families, based mainly on st...

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  • publication . Other literature type . Article . 2016
    Open Access
    Authors:
    George Potamias; George P. Patrinos; Evgenia Kartsaki; Theodora Katsila; Alexandros Kanterakis; Kleanthi Lakiotaki;
    Persistent Identifiers
    Publisher: Public Library of Science (PLoS)
    Project: EC | RD-CONNECT (305444), WT

    One of the challenges that arise from the advent of personal genomics services is to efficiently couple individual data with state of the art Pharmacogenomics (PGx) knowledge. Existing services are limited to either providing static views of PGx variants or applying a s...

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  • publication . Article . Other literature type . 2009
    Open Access
    Authors:
    Panayotis Tsanakas; Giorgos Giannopoulos; Georgios Goumas; Victor A. Simossis; Timos Sellis; Theodore Dalamagas; Martin Reczko; Evangelos Koukis; Thanasis Vergoulis; Panagiotis Alexiou; ...
    Persistent Identifiers
    Publisher: Oxford University Press (OUP)

    Computational microRNA (miRNA) target prediction is one of the key means for deciphering the role of miRNAs in development and disease. Here, we present the DIANA-microT web server as the user interface to the DIANA-microT 3.0 miRNA target prediction algorithm. The web ...

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  • publication . Article . 2010
    Open Access English
    Authors:
    Giorgio L. Papadopoulos; Lin Zhang; Panagiotis Alexiou; Victor A. Simmosis; Artemis G. Hatzigeorgiou; Manolis Maragkakis;
    Persistent Identifiers
    Publisher: Public Library of Science (PLoS)

    Background High-throughput gene expression experiments are widely used to identify the role of genes involved in biological conditions of interest. MicroRNAs (miRNA) are regulatory molecules that have been functionally associated with several developmental programs and ...

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  • publication . Other literature type . Article . 2014
    Open Access
    Authors:
    Timos Sellis; Ilias Kanellos; Artemis G. Hatzigeorgiou; Georgios Georgakilas; Theodore Dalamagas; Thanasis Vergoulis; Nikos Kostoulas;
    Publisher: Oxford University Press (OUP)

    Summary: Identifying, amongst millions of publications available in MEDLINE, those that are relevant to specific microRNAs (miRNAs) of interest based on keyword search faces major obstacles. References to miRNA names in the literature often deviate from standard nomencl...

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49 research outcomes, page 1 of 5