Filters (3 )
Download Results
47 research outcomes, page 1 of 5
  • publication . Preprint . 2014
    Open Access English
    Authors:
    Boyle, P A;
    Project: RCUK | BlueGene/Q Operations for... (ST/K005804/1), RCUK | Particle Theory at the Ta... (ST/J000329/1), RCUK | DiRAC-II Technical workin... (ST/K005790/1), EC | STRONGNET (238353)

    We present a multi-level algorithm for the solution of five dimensional chiral fermion formulations, including domain wall and Mobius Fermions. The algorithm operates on the red-black preconditioned Hermitian operator, and directly accelerates conjugate gradients on the...

  • publication . Article . Other literature type . 2013
    Open Access English
    Authors:
    Jon Ison; James Robert Malone; Hamish McWilliam; Matúš Kalaš; Lopez R; Dan Bolser; Inge Jonassen; Steve Pettifer;
    Publisher: Oxford University Press
    Project: EC | BIOMEDBRIDGES (284209), RCUK | EMBOSS: European Molecula... (BB/G02264X/1), EC | ELIXIR (211601)

    Motivation: Advancing the search, publication and integration of bioinformatics tools and resources demands consistent machine-understandable descriptions. A comprehensive ontology allowing such descriptions is therefore required. Results: EDAM is an ontology of bioinfo...

  • publication . Article . Other literature type . 2014
    Open Access English
    Authors:
    Emily Perry; Bronwen Aken; Eugene Kulesha; Andreas Kusalananda Kahari; Matthieu Muffato; Fiona Cunningham; Laurent Gil; Hubbard TJP; Andrew D Yates; Daniel N Murphy; ...
    Publisher: Oxford University Press
    Project: NIH | Whole genome assembly res... (1R24RR032658-01), EC | HELIX NEBULA (312301), EC | EURATRANS (241504), EC | BLUEPRINT (282510), NIH | GENCODE: comprehensive ge... (5U41HG007234-04), RCUK | Ensembl and enabling gene... (BB/I025506/1), RCUK | Ensembl and enabling gene... (BB/I025360/1), EC | GEN2PHEN (200754), NIH | Functional analysis of th... (5R01HD074078-02), RCUK | Improving the rat referen... (BB/K009524/1),...

    Ensembl (http://www.ensembl.org) creates tools and data resources to facilitate genomic analysis in chordate species with an emphasis on human, major vertebrate model organisms and farm animals. Over the past year we have increased the number of species that we support ...

  • publication . Article . Preprint . Other literature type . 2019
    Open Access English
    Authors:
    Bickerton, J. M.; Horsley, R.; QCDSF-UKQCD-CSSM Collaboration; Nakamura, Y.; Perlt, H.; Pleiter, D.; Rakow, P. E. L.; Schierholz, Gerrit; Stüben, H.; Young, R. D.; ...
    Publisher: APS
    Project: RCUK | Theoretical Particle Phys... (ST/G00062X/1), RCUK | Particle Theory at the Hi... (ST/P000630/1)

    Comment: 70 pages. Small additions and corrections. Published version

  • publication . Article . Other literature type . 2019
    Open Access English
    Authors:
    Simone Kosol; Angelo Gallo; Daniel Griffiths; Timothy R. Valentic; Joleen Masschelein; Matthew Jenner; Emmanuel L. C. de los Santos; Lucio Manzi; Paulina K. Sydor; Dean Rea; ...
    Project: NIH | ChimeraX -- Next Generati... (1R01GM129325-01), RCUK | Exploitation of Burkholde... (BB/L021692/1), RCUK | Warwick Integrative Synth... (BB/M017982/1), EC | NOVENA (656067), NIH | Resource for Biocomputing... (5P41GM103311-36), RCUK | Biophysical basis for the... (BB/L022761/1), EC | West-Life (675858), RCUK | Cross-scale prediction of... (EP/M027503/1), RCUK | 100 kHz magic angle spinn... (EP/L025906/1), RCUK | Exploiting natural produc... (BB/K002341/1),...

    Modular polyketide synthases and non-ribosomal peptide synthetases are molecular assembly lines that consist of several multienzyme subunits that undergo dynamic self-assembly to form a functional megacomplex. N- and C-terminal docking domains are usually responsible fo...

  • publication . Article . 2015
    Open Access English
    Authors:
    Farabella, Irene; Vasishtan, Daven; Joseph, Agnel Praveen; Pandurangan, Arun Prasad; Sahota, Harpal; Topf, Maya;
    Publisher: International Union of Crystallography
    Project: RCUK | Tools for Generating and ... (BB/K01692X/1), EC | BIOMEDBRIDGES (284209), WT , RCUK | Structural characterizati... (G0600084)

    TEMPy is an object-oriented Python library that provides the means to validate density fits in electron microscopy reconstructions. This article highlights several features of particular interest for this purpose and includes some customized examples.

  • publication . Article . Other literature type . 2018
    Open Access
    Authors:
    Typhaine Paysan-Lafosse; John Berrisford; Aleksandras Gutmanas; Abhik Mukhopadhyay; Mandar Deshpande; Alice Clark; Gerard J. Kleywegt; Stephen Anyango; Pauline Haslam; Jose M. Dana; ...
    Publisher: Oxford University Press (OUP)
    Project: RCUK | Expanding Genome3D and di... (BB/N019172/1), EC | BIOMEDBRIDGES (284209), WT | Protein Data Bank in Euro... (104948), RCUK | Expanding the knowledge o... (BB/M011674/1)

    Abstract The Protein Data Bank in Europe (PDBe, pdbe.org) is actively engaged in the deposition, annotation, remediation, enrichment and dissemination of macromolecular structure data. This paper describes new developments and improvements at PDBe addressing three chall...

  • publication . Preprint . 2014
    Open Access English
    Authors:
    Miller, Andrew; Novère, Nicolas; Yvon, Florent; Waltemath, Dagmar; Soiland-Reyes, Stian; Scharm, Martin; Sauro, Herbert; Rodriguez, Nicolas; Olivier, Brett; Nickerson, David; ...
    Project: NIH | Continued Support of Esse... (5R01GM070923-14), WT , RCUK | A new approach to Science... (EP/I017909/1), EC | DDMORE (115156), NIH | PROJECT 4 (1P50GM094503-01A1), EC | WF4EVER (270192), EC | BIOVEL (283359), NIH | Continued Development and... (5R01GM081070-02)

    Background: With the ever increasing use of computational models in the biosciences, the need to share models and reproduce the results of published studies efficiently and easily is becoming more important. To this end, various standards have been proposed that can be ...

  • publication . Research . undefined
    Open Access
    Project: RCUK | Nests admission project (752208)
  • publication . Preprint . Conference object . 2018
    Open Access English
    Authors:
    Gülpers, Vera; Jüttner, Andreas; Christoph Lehner; Portelli, Antonin;
    Project: RCUK | DiRAC-II Technical workin... (ST/K005790/1), EC | NEWPHYSICSHPC (279757), RCUK | New Frontiers in Particle... (ST/P000711/1), RCUK | BlueGene/Q Operations for... (ST/K005804/1), EC | NewPhysLat (757646), RCUK | DiRAC BlueGene/Q Upgrade (ST/K000411/1), RCUK | Particle Theory at the Hi... (ST/L000458/1), RCUK | Particle Theory at the Hi... (ST/P000630/1)

    A determination of the hadronic vacuum polarization contribution to the anomalous magnetic moment of the muon from lattice QCD aiming at a precision of $1\%$ requires to include isospin breaking corrections in the computation. We present a lattice calculation of the QED...

47 research outcomes, page 1 of 5
Last index information