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scPerturb Single-Cell Perturbation Data: RNA and protein h5ad files

Name: scPerturb Single-Cell Perturbation Data: RNA and protein h5ad files
Keywords: Single-cell, ATAC-seq, RNA-seq, Perturbation

Research datakeyboard_double_arrow_right Dataset 22 Aug 2022Publisher:Zenodo

Authors: Peidli, Stefan; Green, Tessa D.; Shen, Ciyue; Gross, Torsten; Min, Joseph; Taylor-King, Jake P.; Marks, Debora S.; +3 Authors

doi: 10.5281/zenodo.7041849 , 10.5281/zenodo.7278143 , 10.5281/zenodo.7416068

scPerturb Single-Cell Perturbation Data: RNA and protein h5ad files

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Abstract

Secondary upload of datasets on scPerturb.org h5ad files for RNA and protein datasets, created using scanpy 1.9.1

Version notes: 1.1 corrects an error in the RA dose values in GehringPachter2019

Related Organizations

Harvard University
United States
Dana-Farber Cancer Institute
United States
Broad Institute
United States

Keywords

Single-cell, ATAC-seq, RNA-seq, Perturbation

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