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Research data . Dataset . 2019

Sample datasets for Transposon insertion sequencing analysis tutorial

Lariviere, Delphine; Nekrutenko, Anton;
Open Access
Published: 27 Feb 2019
Publisher: Zenodo

The dataset contains five files: Tnseq-Tutorial-reads.fastqsanger.gz - A subset of TnSeq reads published in `Santiago, M., Matano, L. M., Moussa, S. H., Gilmore, M. S., Walker, S., & Meredith, T. C. (2015). A new platform for ultra-high density Staphylococcus aureus transposon libraries. BMC Genomics, 16(1), 1–18.` condition_barcodes.fasta - Set of barcodes to separate reads from different experimental conditions construct_barcodes.fasta - Set of barcodes to separate reads from different transposon constructs staph_aur.fasta : Genome file for Staphylococcus aureus staph_aur.fasta : Annotation file for Staphylococcus aureus


TnSeq, Staphylococcus aureus, Galaxy Training Material