AnnoTree: Functionally Annotated Tree of Life

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<p><strong>Current version:</strong><br> 2019-02-01: This file is a MySQL (v5.7) dump&nbsp;for AnnoTree, a functionally annotated tree of life.&nbsp;It includes the databases &#39;gtdb_bacteria_RS86&#39; and &#39;gtdb_archaea_RS86&#39;. Both databases include <a href="https://pfam.xfam.org/">Pfam</a>&nbsp;(v27), <a href="https://www.genome.jp/kegg/">KEGG</a> Ontology (from the <a href="https://www.uniprot.org/help/uniref">UniRef100</a> database downloaded March 6, 2018), and <a href="http://tigrfams.jcvi.org/cgi-bin/index.cgi">TIGRFAM</a>&nbsp;(v15) annotations for the representative genomes in <a href="http://gtdb.ecogenomic.org/">GTDB</a> release 03-RS86.</p> <p>Please refer to <a href="http://annotree.uwaterloo.ca">http://annotree.uwaterloo.ca</a> for the full site.</p> <p>&nbsp;</p> <p><strong>Older versions:</strong><br> 2018-10-22: MySQL dump file (v5.7)&nbsp;containing the &#39;gtdb_bacteria&#39; database for GTDB release 02-RS83 for use with AnnoTree. Functional annotations include <a href="https://pfam.xfam.org/">Pfam</a>&nbsp;(v27) and&nbsp;<a href="https://www.genome.jp/kegg/">KEGG</a> Ontology (from the <a href="https://www.uniprot.org/help/uniref">UniRef100</a> database downloaded March 6, 2018). Corresponds to AnnoTree version 1.0.0 before the integration of Archaea.</p>
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