research data . Dataset . 2017

Annotation table - Whole body transcriptomes of the tick Ixodes ricinus at different stage and feeding conditions

N Pierre Charrier; Marjorie Couton; Maarten J Voordouw; Olivier Rais; Axelle Durand-Hermouet; Caroline Hervet; Olivier Plantard; Claude Rispe;
Open Access
  • Published: 01 Aug 2017
  • Publisher: Zenodo
Abstract
<p>Annotation table for a <em>de novo</em> assembled transcriptome of<em> Ixodes ricinus</em> in different stages and conditions.</p> <p>Description of the fields of each column (Trinotate results, and additionnal statistics):</p> <p>1. Contig_name:&nbsp; name of the contig (Trinity assembly)</p> <p>2. sprot_Top_BLASTX_hit: first hit of the blastx search against SwissProt (https://data.broadinstitute.org/Trinity/Trinotate v2.0 RESOURCES/)</p> <p>3. TrEMBL_Top_BLASTX_hit: first hit of the blastx search against Uniref90 (https://data.broadinstitute.org/Trinity/Trinotate v2.0 RESOURCES/)</p> <p>4. RNAMMER: identification of non-coding RNAs</p> <p>5. prot_id: identi...
Subjects
free text keywords: Ixodes ricinus, RNA-Seq, De novo assembly, Expression profiling, Polymorphism
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Dataset . 2017
Provider: Zenodo
Zenodo
Dataset . 2017
Provider: Datacite
Zenodo
Dataset . 2017
Provider: Datacite
Zenodo
Dataset . 2017
Provider: Zenodo
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research data . Dataset . 2017

Annotation table - Whole body transcriptomes of the tick Ixodes ricinus at different stage and feeding conditions

N Pierre Charrier; Marjorie Couton; Maarten J Voordouw; Olivier Rais; Axelle Durand-Hermouet; Caroline Hervet; Olivier Plantard; Claude Rispe;