research data . Dataset . 2017

Annotation table - Whole body transcriptomes of the tick Ixodes ricinus at different stage and feeding conditions

Charrier, N Pierre; Couton, Marjorie; Voordouw, Maarten J; Rais, Olivier; Durand-Hermouet, Axelle; Hervet, Caroline; Plantard, Olivier; Rispe, Claude;
Open Access
  • Published: 01 Aug 2017
  • Publisher: Zenodo
Abstract
<p>Annotation table for a <em>de novo</em> assembled transcriptome of<em> Ixodes ricinus</em> in different stages and conditions.</p> <p>Description of the fields of each column (Trinotate results, and additionnal statistics):</p> <p>1. Contig_name:&nbsp; name of the contig (Trinity assembly)</p> <p>2. sprot_Top_BLASTX_hit: first hit of the blastx search against SwissProt (https://data.broadinstitute.org/Trinity/Trinotate v2.0 RESOURCES/)</p> <p>3. TrEMBL_Top_BLASTX_hit: first hit of the blastx search against Uniref90 (https://data.broadinstitute.org/Trinity/Trinotate v2.0 RESOURCES/)</p> <p>4. RNAMMER: identification of non-coding RNAs</p> <p>5. prot_id: identi...
Subjects
free text keywords: Ixodes ricinus, RNA-Seq, De novo assembly, Expression profiling, Polymorphism, Biochemistry, Microbiology, Genetics, Molecular Biology, Pharmacology, Ecology, Inorganic Chemistry, Plant Biology, 69999 Biological Sciences not elsewhere classified, 39999 Chemical Sciences not elsewhere classified, 80699 Information Systems not elsewhere classified, Science Policy
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Dataset . 2017
Provider: Zenodo
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Dataset . 2017
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Zenodo
Dataset . 2017
Provider: Datacite
Zenodo
Dataset . 2017
Provider: Zenodo
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