research data . Dataset . 2016

Transcriptome Analysis of Houttuynia cordata Thunb. by Illumina Paired-End RNA Sequencing and SSR Marker Discovery

Wei, Lin; Li, Shenghua; Liu, Shenggui; He, Anna; Wang, Dan; Wang, Jie; Tang, Yulian; Wu, Xianjin;
  • Published: 01 Jan 2016
  • Publisher: Figshare
Abstract
<div><p>Background</p><p><i>Houttuynia cordata</i> Thunb. is an important traditional medical herb in China and other Asian countries, with high medicinal and economic value. However, a lack of available genomic information has become a limitation for research on this species. Thus, we carried out high-throughput transcriptomic sequencing of <i>H. cordata</i> to generate an enormous transcriptome sequence dataset for gene discovery and molecular marker development.</p><p>Principal Findings</p><p>Illumina paired-end sequencing technology produced over 56 million sequencing reads from <i>H. cordata</i> mRNA. Subsequent de novo assembly yielded 63,954 unigenes, 39,...
Subjects
free text keywords: Medicine, Biological Sciences, Computational biology, genomics, Genome analysis tools, Gene ontologies, transcriptomes, genetics, population genetics, Genetic polymorphism, Plant science, Plant genomics, Complementary and alternative medicine, transcriptome, illumina, paired-end, rna, sequencing, ssr
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Dataset . 2016
Provider: figshare
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