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GTEx exon-exon-junction-level expression summary for Snaptron

Name: GTEx exon-exon-junction-level expression summary for Snaptron
Keywords: gtex exon summary rna-seq

Research datakeyboard_double_arrow_right Dataset 25 Feb 2019Publisher:ZenodoFunded by:NIH | Methods for high-resoluti..., NIH | Harnessing GTEx to Create..., NIH | Identification and valida... +6 projects

Authors: Langmead, Benjamin; Wilks, Christopher;

doi: 10.5281/zenodo.2577428 , 10.5281/zenodo.2577429

GTEx exon-exon-junction-level expression summary for Snaptron

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Abstract

GTEx exon-level expression summary from the Snaptron collection. Format is a tab-separated text file compressed and indexed using BGZip, along with supplementary files containing a Tabix index for the data (ending in tbi) as well as two files describing the samples represented in the columns of the data file (ending in tsv). Uses Rail-RNA for spliced alignment. More information at http://snaptron.cs.jhu.edu.

Supported by NIH grant R01GM118568 to BL and NIH Cloud Credits Pilot award CCREQ-2017-03-00086 to BL

Related Organizations

Johns Hopkins University
United States

Keywords

gtex exon summary rna-seq

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7 Research products, page 1 of 1

Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples
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Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples
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GTEx exon-level expression summary
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GTEx exon-level expression summaries for Snaptron
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