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Pfam

Protein Families
Description

The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs). Pfam also generates higher-level groupings of related entries, known as clans. A clan is a collection of Pfam entries which are related by similarity of sequence, structure or profile-HMM.

Countries
United States, United Kingdom, Sweden
Subjects
Biology, Functional domain, Hidden Markov model, Sequence similarity, Protein domain, Multiple sequence alignment, Computational biological predictions, Function analysis, Proteome, Binding motif, Evolution, Sequence alignment, Protein, Amino acid sequence, Sequence motif, Biocuration
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