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3 research outcomes, page 1 of 1
  • software . 2017
    Open Access English
    Authors:
    Rau, Andrea; MAUGIS RABUSSEAU, Cathy; Godichon-Baggioni, Antoine;
    Publisher: HAL CCSD

    Co-expression analysis for expression profiles arising from high-throughput sequencing data. Feature (e.g., gene) profiles are clustered using adapted transformations and mixture models or a K-means algorithm, and model selection criteria (to choose an appropriate numbe...

  • software . 2017
    Open Access English
    Authors:
    Neuvial, Pierre; Ambroise, Christophe; Chaturvedi, Shubham; Dehman, Alia; Koskas, Michel; Rigaill, Guillem; Vialaneix, Nathalie;
    Publisher: HAL CCSD

    Implements a constrained version of hierarchical agglomerative clustering, in which each observation is associated to a position, and only adjacent clusters can be merged. Typical application fields in bioinformatics include Genome-Wide Association Studies or Hi-C data ...

  • software . 2017
    Open Access English
    Authors:
    Lefort, Gaëlle; Servien, Remi; Tardivel, Patrick; Vialaneix, Nathalie;
    Publisher: HAL CCSD

    With a set of pure metabolite reference spectra, ASICS quantifies concentration of metabolites in a complex spectrum. The identification of metabolites is performed by fitting a mixture model to the spectra of the library with a sparse penalty. The method and its statis...

3 research outcomes, page 1 of 1
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