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description Publicationkeyboard_double_arrow_right Other literature type , Part of book or chapter of book , Conference object 2019 Portugal, ItalySpringer International Publishing WT, EC | OpenAIRE-Advance (777541), EC | OpenAIRE-Connect (731011)Miriam Baglioni; Alessia Bardi; Argiro Kokogiannaki; Paolo Manghi; Katerina Iatropoulou; Pedro Príncipe; André Vieira; Lars Holm Nielsen; Harry Dimitropoulos; Ioannis Foufoulas; Natalia Manola; Claudio Atzori; Sandro La Bruzzo; Emma Lazzeri; Michele Artini; Michele De Bonis; Andrea Dell’Amico;handle: 1822/62856
Despite the hype, the effective implementation of Open Science is hindered by several cultural and technical barriers. Researchers embraced digital science, use “digital laboratories” (e.g. research infrastructures, thematic services) to conduct their research and publish research data, but practices and tools are still far from achieving the expectations of transparency and reproducibility of Open Science. The places where science is performed and the places where science is published are still regarded as different realms. Publishing is still a post-experimental, tedious, manual process, too often limited to articles, in some contexts semantically linked to datasets, rarely to software, generally disregarding digital representations of experiments. In this work we present the OpenAIRE Research Community Dashboard (RCD), designed to overcome some of these barriers for a given research community, minimizing the technical efforts and without renouncing any of the community services or practices. The RCD flanks digital laboratories of research communities with scholarly communication tools for discovering and publishing interlinked scientific products such as literature, datasets, and software. The benefits of the RCD are show-cased by means of two real-case scenarios: the European Marine Science community and the European Plate Observing System (EPOS) research infrastructure. This work is partly funded by the OpenAIRE-Advance H2020 project (grant number: 777541; call: H2020-EINFRA-2017) and the OpenAIREConnect H2020 project (grant number: 731011; call: H2020-EINFRA-2016-1). Moreover, we would like to thank our colleagues Michele Manunta, Francesco Casu, and Claudio De Luca (Institute for the Electromagnetic Sensing of the Environment, CNR, Italy) for their work on the EPOS infrastructure RCD; and Stephane Pesant (University of Bremen, Germany) his work on the European Marine Science RCD. First Online 30 August 2019
Universidade do Minh... arrow_drop_down Universidade do Minho: RepositoriUMOther literature type . 2019Data sources: Universidade do Minho: RepositoriUMhttp://repositorium.sdum.uminh...Part of book or chapter of bookLicense: cc-byData sources: UnpayWallhttps://doi.org/10.1007/978-3-...Part of book or chapter of book . 2019License: http://www.springer.com/tdmData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
visibility 59visibility views 59 download downloads 2 Powered bydescription Publicationkeyboard_double_arrow_right External research report 2010 Greece Greek, Modern (1453-)Εθνικό Κέντρο Τεκμηρίωσης (ΕΚΤ) Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=od______1457::15a28af76b398d4d3375b1ec3962219f&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Conference object , Other literature type 2009 Greece EnglishSachini, E.; Tsoukala, V.; Nikos Houssos; Stathopoulou, I. -O; Paschou, C. -E; Paraskevopoulou, A.;Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=dedup_wf_001::a0c647b66a4986da1a4c0dcf784394fb&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2015 Netherlands, France, France, Spain, France, France EnglishHAL CCSD EC | WENMR (261572), EC | EGI-INSPIRE (261323), WTDuarte, Afonso M S; Psomopoulos, Fotis E; Blanchet, Christophe; Bonvin, Alexandre M J J; Corpas, Manuel; Franc, Alain; Jimenez, Rafael C; de Lucas, Jesus M; Nyrönen, Tommi; Sipos, Gergely; Suhr, Stephanie B; Sub NMR Spectroscopy; NMR Spectroscopy;With the increasingly rapid growth of data in life sciences we are witnessing a major transition in the way research is conducted, from hypothesis-driven studies to data-driven simulations of whole systems. Such approaches necessitate the use of large-scale computational resources and e-infrastructures, such as the European Grid Infrastructure (EGI). EGI, one of key the enablers of the digital European Research Area, is a federation of resource providers set up to deliver sustainable, integrated and secure computing services to European researchers and their international partners. Here we aim to provide the state of the art of Grid/Cloud computing in EU research as viewed from within the field of life sciences, focusing on key infrastructures and projects within the life sciences community. Rather than focusing purely on the technical aspects underlying the currently provided solutions, we outline the design aspects and key characteristics that can be identified across major research approaches. Overall, we aim to provide significant insights into the road ahead by establishing ever-strengthening connections between EGI as a whole and the life sciences community. AD was supported by Fundação para a Ciência e a Tecnologia, Portugal (SFRH/BPD/78075/2011 and EXPL/BBBBEP/1356/2013). FP has been supported by the National Grid Infrastructure NGI_GRNET, HellasGRID, as part of the EGI. IFB acknowledges funding from the “National Infrastructures in Biology and Health” call of the French “Investments for the Future” initiative. The WeNMR project has been funded by a European FP7 e-Infrastructure grant, contract no. 261572. AF was supported by a grant from Labex CEBA (Centre d’études de la Biodiversité Amazonienne) from ANR. MC is supported by UK’s BBSRC core funding. CSC was supported by Academy of Finland grant No. 273655 for ELIXIR Finland. The EGI-InSPIRE project (Integrated Sustainable Pan-European Infrastructure for Researchers in Europe) is co-funded by the European Commission (contract number: RI-261323). The BioMedBridges project is funded by the European Commission within Research Infrastructures of the FP7 Capacities Specific Programme, grant agreement number 284209. This is an open-access article.-- et al. Peer Reviewed
NARCIS arrow_drop_down Frontiers in Genetics; Hyper Article en Ligne; FrontiersOther literature type . Article . 2015 . 2016Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICArticle . 2015add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fgene.2015.00197&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu8 citations 8 popularity Average influence Average impulse Average Powered by BIP!
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description Publicationkeyboard_double_arrow_right Other literature type , Part of book or chapter of book , Conference object 2019 Portugal, ItalySpringer International Publishing WT, EC | OpenAIRE-Advance (777541), EC | OpenAIRE-Connect (731011)Miriam Baglioni; Alessia Bardi; Argiro Kokogiannaki; Paolo Manghi; Katerina Iatropoulou; Pedro Príncipe; André Vieira; Lars Holm Nielsen; Harry Dimitropoulos; Ioannis Foufoulas; Natalia Manola; Claudio Atzori; Sandro La Bruzzo; Emma Lazzeri; Michele Artini; Michele De Bonis; Andrea Dell’Amico;handle: 1822/62856
Despite the hype, the effective implementation of Open Science is hindered by several cultural and technical barriers. Researchers embraced digital science, use “digital laboratories” (e.g. research infrastructures, thematic services) to conduct their research and publish research data, but practices and tools are still far from achieving the expectations of transparency and reproducibility of Open Science. The places where science is performed and the places where science is published are still regarded as different realms. Publishing is still a post-experimental, tedious, manual process, too often limited to articles, in some contexts semantically linked to datasets, rarely to software, generally disregarding digital representations of experiments. In this work we present the OpenAIRE Research Community Dashboard (RCD), designed to overcome some of these barriers for a given research community, minimizing the technical efforts and without renouncing any of the community services or practices. The RCD flanks digital laboratories of research communities with scholarly communication tools for discovering and publishing interlinked scientific products such as literature, datasets, and software. The benefits of the RCD are show-cased by means of two real-case scenarios: the European Marine Science community and the European Plate Observing System (EPOS) research infrastructure. This work is partly funded by the OpenAIRE-Advance H2020 project (grant number: 777541; call: H2020-EINFRA-2017) and the OpenAIREConnect H2020 project (grant number: 731011; call: H2020-EINFRA-2016-1). Moreover, we would like to thank our colleagues Michele Manunta, Francesco Casu, and Claudio De Luca (Institute for the Electromagnetic Sensing of the Environment, CNR, Italy) for their work on the EPOS infrastructure RCD; and Stephane Pesant (University of Bremen, Germany) his work on the European Marine Science RCD. First Online 30 August 2019
Universidade do Minh... arrow_drop_down Universidade do Minho: RepositoriUMOther literature type . 2019Data sources: Universidade do Minho: RepositoriUMhttp://repositorium.sdum.uminh...Part of book or chapter of bookLicense: cc-byData sources: UnpayWallhttps://doi.org/10.1007/978-3-...Part of book or chapter of book . 2019License: http://www.springer.com/tdmData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1007/978-3-030-30760-8_5&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
visibility 59visibility views 59 download downloads 2 Powered bydescription Publicationkeyboard_double_arrow_right External research report 2010 Greece Greek, Modern (1453-)Εθνικό Κέντρο Τεκμηρίωσης (ΕΚΤ) Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=od______1457::15a28af76b398d4d3375b1ec3962219f&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Conference object , Other literature type 2009 Greece EnglishSachini, E.; Tsoukala, V.; Nikos Houssos; Stathopoulou, I. -O; Paschou, C. -E; Paraskevopoulou, A.;Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=dedup_wf_001::a0c647b66a4986da1a4c0dcf784394fb&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2015 Netherlands, France, France, Spain, France, France EnglishHAL CCSD EC | WENMR (261572), EC | EGI-INSPIRE (261323), WTDuarte, Afonso M S; Psomopoulos, Fotis E; Blanchet, Christophe; Bonvin, Alexandre M J J; Corpas, Manuel; Franc, Alain; Jimenez, Rafael C; de Lucas, Jesus M; Nyrönen, Tommi; Sipos, Gergely; Suhr, Stephanie B; Sub NMR Spectroscopy; NMR Spectroscopy;With the increasingly rapid growth of data in life sciences we are witnessing a major transition in the way research is conducted, from hypothesis-driven studies to data-driven simulations of whole systems. Such approaches necessitate the use of large-scale computational resources and e-infrastructures, such as the European Grid Infrastructure (EGI). EGI, one of key the enablers of the digital European Research Area, is a federation of resource providers set up to deliver sustainable, integrated and secure computing services to European researchers and their international partners. Here we aim to provide the state of the art of Grid/Cloud computing in EU research as viewed from within the field of life sciences, focusing on key infrastructures and projects within the life sciences community. Rather than focusing purely on the technical aspects underlying the currently provided solutions, we outline the design aspects and key characteristics that can be identified across major research approaches. Overall, we aim to provide significant insights into the road ahead by establishing ever-strengthening connections between EGI as a whole and the life sciences community. AD was supported by Fundação para a Ciência e a Tecnologia, Portugal (SFRH/BPD/78075/2011 and EXPL/BBBBEP/1356/2013). FP has been supported by the National Grid Infrastructure NGI_GRNET, HellasGRID, as part of the EGI. IFB acknowledges funding from the “National Infrastructures in Biology and Health” call of the French “Investments for the Future” initiative. The WeNMR project has been funded by a European FP7 e-Infrastructure grant, contract no. 261572. AF was supported by a grant from Labex CEBA (Centre d’études de la Biodiversité Amazonienne) from ANR. MC is supported by UK’s BBSRC core funding. CSC was supported by Academy of Finland grant No. 273655 for ELIXIR Finland. The EGI-InSPIRE project (Integrated Sustainable Pan-European Infrastructure for Researchers in Europe) is co-funded by the European Commission (contract number: RI-261323). The BioMedBridges project is funded by the European Commission within Research Infrastructures of the FP7 Capacities Specific Programme, grant agreement number 284209. This is an open-access article.-- et al. Peer Reviewed
NARCIS arrow_drop_down Frontiers in Genetics; Hyper Article en Ligne; FrontiersOther literature type . Article . 2015 . 2016Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICArticle . 2015add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.Do the share buttons not appear? Please make sure, any blocking addon is disabled, and then reload the page.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fgene.2015.00197&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu8 citations 8 popularity Average influence Average impulse Average Powered by BIP!
visibility 16visibility views 16 download downloads 17 Powered by