1,496 Research products

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2019-2023
Natural Sciences and Engineering Research Council of Canada
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Supplementary File 2 from Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls a key fitness trait affecting red coloration
Research datakeyboard_double_arrow_right Dataset 2019The Royal Society NSERC
NSERC
Authors: S. J. Lehnert; K. A. Christensen; W. E. Vandersteen; D. Sakhrani; +5 Authors
S. J. Lehnert; K. A. Christensen; W. E. Vandersteen; D. Sakhrani; T. E. Pitcher; J. W. Heath; B. F. Koop; D. D. Heath; R. H. Devlin;
doi: 10.6084/m9.figshare.9912668.v1 , 10.6084/m9.figshare.9912668
doi: 10.6084/m9.figshare.9912668.v1 , 10.6084/m9.figshare.9912668
Supplementary custom python script 3
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Dataset . 2019
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Additional file 1 of Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC
NSERC
Authors: Butenko, Anzhelika; Opperdoes, Fred; Flegontova, Olga; Aleš Horák; +6 Authors
Butenko, Anzhelika; Opperdoes, Fred; Flegontova, Olga; Aleš Horák; Hampl, Vladimír; Keeling, Patrick; Gawryluk, Ryan; Tikhonenkov, Denis; Flegontov, Pavel; Lukeš, Julius;
doi: 10.6084/m9.figshare.11924550.v1 , 10.6084/m9.figshare.11924550
doi: 10.6084/m9.figshare.11924550.v1 , 10.6084/m9.figshare.11924550
Additional file 1: Table S1. Genomes and transcriptomes of diplonemid, euglenid and kinetoplstid species analyzed in this study. Naegleria gruberi was used as an outgroup in phylogenomic analysis. Table S2. Genomes and transcriptomes of free-living and parasitic/symbiotic protists used in this study.
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Dataset . 2020
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Additional file 23 of Fluid flow exposure promotes epithelial-to-mesenchymal transition and adhesion of breast cancer cells to endothelial cells
Research datakeyboard_double_arrow_right Dataset 2021figshare NSERC
NSERC
Authors: Fuh, Kenneth F.; Shepherd, Robert D.; Withell, Jessica S.; Kooistra, Brayden K.; +1 Authors
Fuh, Kenneth F.; Shepherd, Robert D.; Withell, Jessica S.; Kooistra, Brayden K.; Rinker, Kristina D.;
doi: 10.6084/m9.figshare.16800734.v1 , 10.6084/m9.figshare.16800734
doi: 10.6084/m9.figshare.16800734.v1 , 10.6084/m9.figshare.16800734
Additional file 23. Microarray image data from replicate 3 of MCF-7 breast cancer cells grown in static culture.
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Dataset . 2021
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Additional file 2: of Tumor suppressor role of cytoplasmic polyadenylation element binding protein 2 (CPEB2) in human mammary epithelial cells
Research datakeyboard_double_arrow_right Image 2019figshare NSERC
NSERC
Authors: Tordjman, Joshua; Mousumi Majumder; Amiri, Mehdi; Hasan, Asma; +2 Authors
Tordjman, Joshua; Mousumi Majumder; Amiri, Mehdi; Hasan, Asma; Hess, David; Peeyush Lala;
doi: 10.6084/m9.figshare.8260802.v1 , 10.6084/m9.figshare.8260802
doi: 10.6084/m9.figshare.8260802.v1 , 10.6084/m9.figshare.8260802
Figure S2. Migration, invasion and proliferation in MCF7 cells after CPEB2KD. (A) Migration and (B) invasion measured in transwells respectively at 24 and 48 h reveal significant increases in CPEB2KD cells (p
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Image . 2019
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Auxosporulation in Chaetoceros acadianus sp. nov. (Bacillariophyceae), a new member of the Section Compressa
Research datakeyboard_double_arrow_right Dataset 2019Taylor & Francis NSERC
NSERC
Authors: Kaczmarska, Irena; Brajogopal Samanta; Ehrman, James M.; Porcher, Ellen M. A.;
Kaczmarska, Irena; Brajogopal Samanta; Ehrman, James M.; Porcher, Ellen M. A.;
doi: 10.6084/m9.figshare.7751255.v1 , 10.6084/m9.figshare.7751255
doi: 10.6084/m9.figshare.7751255.v1 , 10.6084/m9.figshare.7751255
We document the fine structure of auxospores in a Chaetoceros species isolated from the Acadian coast of New Brunswick, Canada. Auxospore development in this species occurs in a terminal rather than lateral position, a characteristic never before observed in this genus. Our observations suggest that auxosporulation was uniparental, probably an extreme form of autogamy with sister nuclei fusing following meiosis II. Mature auxospores were adze-shaped to sub-globular and contained both scales and transverse perizonia in their walls. The transverse perizonial band structure was similar to longitudinal perizonial bands found in other species of Chaetoceros and differed from the pinnate bands of pennate transverse perizonia, which consisted of a central rib and bilateral fimbria. Instead, the band structure in C. acadianus was more similar to unilateral fimbriate bands in cymatosiroids. We also propose that our diatom represents a species new to science and is a member of the Chaetoceros Section Compressa. We provide its morphological, molecular and reproductive characterization.
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Dataset . 2019
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Single-pulse terahertz spectroscopy monitoring sub-millisecond time dynamics at a rate of 50 kHz
Research datakeyboard_double_arrow_right Dataset 2023figshare NSERC
NSERC
Authors: Couture, Nicolas; Ménard, Jean-Michel;
Couture, Nicolas; Ménard, Jean-Michel;
doi: 10.6084/m9.figshare.22575004.v1 , 10.6084/m9.figshare.22575004
doi: 10.6084/m9.figshare.22575004.v1 , 10.6084/m9.figshare.22575004
The data contained in the folder support the findings in the manuscript entitled "Single-pulse terahertz spectroscopy monitoring sub-millisecond time dynamics at a rate of 50 kHz" by Couture et al. published in Nature Communications (2023). This data corresponds to the results shown in Fig. 3c-e.
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Dataset . 2023
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Dataset . 2023
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Additional file 3 of Global properties of regulatory sequences are predicted by transcription factor recognition mechanisms
Research datakeyboard_double_arrow_right Dataset 2021figshare NSERC, CIHR
NSERC ,
CIHR
Authors: Patel, Zain M.; Hughes, Timothy R.;
Patel, Zain M.; Hughes, Timothy R.;
doi: 10.6084/m9.figshare.16767613 , 10.6084/m9.figshare.16767613.v1
doi: 10.6084/m9.figshare.16767613 , 10.6084/m9.figshare.16767613.v1
Additional file 3 : Table S2. Exact file IDs and links to all data obtained from ENCODE and Roadmap Epigenome.
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Dataset . 2021
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Additional file 12 of Biologically relevant transfer learning improves transcription factor binding prediction
Research datakeyboard_double_arrow_right Dataset 2021figshare NSERC, CIHR
NSERC ,
CIHR
Authors: Novakovsky, Gherman; Saraswat, Manu; Fornes, Oriol; Mostafavi, Sara; +1 Authors
Novakovsky, Gherman; Saraswat, Manu; Fornes, Oriol; Mostafavi, Sara; Wasserman, Wyeth W.;
doi: 10.6084/m9.figshare.16689798 , 10.6084/m9.figshare.16689798.v1
doi: 10.6084/m9.figshare.16689798 , 10.6084/m9.figshare.16689798.v1
Additional file 12: Table S1. Total number of ones, zeros and nulls in the sparse matrix for the 163 TFs used in this study.
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Additional file 13 of Pulmonary and systemic responses to aerosolized lysate of Staphylococcus aureus and Escherichia coli in calves
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC
NSERC
Authors: Bassel, Laura L.; Carmon Co; Macdonald, Alaina; Sly, Laurel; +7 Authors
Bassel, Laura L.; Carmon Co; Macdonald, Alaina; Sly, Laurel; McCandless, Erin E.; Hewson, Joanne; Raksha Tiwari; Shayan Sharif; Siracusa, Laura; Clark, Mary Ellen; Caswell, Jeff L.;
doi: 10.6084/m9.figshare.12399422 , 10.6084/m9.figshare.12399422.v1
doi: 10.6084/m9.figshare.12399422 , 10.6084/m9.figshare.12399422.v1
Additional file 13. Data.
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Average vessel radius atlas
Research datakeyboard_double_arrow_right Dataset 2019figshare NSERC
NSERC
Authors: Forkert, Nils Daniel; Mouches, Pauline;
Forkert, Nils Daniel; Mouches, Pauline;
doi: 10.6084/m9.figshare.7026185.v1 , 10.6084/m9.figshare.7026185
doi: 10.6084/m9.figshare.7026185.v1 , 10.6084/m9.figshare.7026185
Average vessel radius atlas (in mm)
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Supplementary File 2 from Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls a key fitness trait affecting red coloration
Research datakeyboard_double_arrow_right Dataset 2019The Royal Society NSERC
NSERC
Authors: S. J. Lehnert; K. A. Christensen; W. E. Vandersteen; D. Sakhrani; +5 Authors
S. J. Lehnert; K. A. Christensen; W. E. Vandersteen; D. Sakhrani; T. E. Pitcher; J. W. Heath; B. F. Koop; D. D. Heath; R. H. Devlin;
doi: 10.6084/m9.figshare.9912668.v1 , 10.6084/m9.figshare.9912668
doi: 10.6084/m9.figshare.9912668.v1 , 10.6084/m9.figshare.9912668
Supplementary custom python script 3
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Dataset . 2019
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Additional file 1 of Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC
NSERC
Authors: Butenko, Anzhelika; Opperdoes, Fred; Flegontova, Olga; Aleš Horák; +6 Authors
Butenko, Anzhelika; Opperdoes, Fred; Flegontova, Olga; Aleš Horák; Hampl, Vladimír; Keeling, Patrick; Gawryluk, Ryan; Tikhonenkov, Denis; Flegontov, Pavel; Lukeš, Julius;
doi: 10.6084/m9.figshare.11924550.v1 , 10.6084/m9.figshare.11924550
doi: 10.6084/m9.figshare.11924550.v1 , 10.6084/m9.figshare.11924550
Additional file 1: Table S1. Genomes and transcriptomes of diplonemid, euglenid and kinetoplstid species analyzed in this study. Naegleria gruberi was used as an outgroup in phylogenomic analysis. Table S2. Genomes and transcriptomes of free-living and parasitic/symbiotic protists used in this study.
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Dataset . 2020
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Additional file 23 of Fluid flow exposure promotes epithelial-to-mesenchymal transition and adhesion of breast cancer cells to endothelial cells
Research datakeyboard_double_arrow_right Dataset 2021figshare NSERC
NSERC
Authors: Fuh, Kenneth F.; Shepherd, Robert D.; Withell, Jessica S.; Kooistra, Brayden K.; +1 Authors
Fuh, Kenneth F.; Shepherd, Robert D.; Withell, Jessica S.; Kooistra, Brayden K.; Rinker, Kristina D.;
doi: 10.6084/m9.figshare.16800734.v1 , 10.6084/m9.figshare.16800734
doi: 10.6084/m9.figshare.16800734.v1 , 10.6084/m9.figshare.16800734
Additional file 23. Microarray image data from replicate 3 of MCF-7 breast cancer cells grown in static culture.
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Dataset . 2021
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Additional file 2: of Tumor suppressor role of cytoplasmic polyadenylation element binding protein 2 (CPEB2) in human mammary epithelial cells
Research datakeyboard_double_arrow_right Image 2019figshare NSERC
NSERC
Authors: Tordjman, Joshua; Mousumi Majumder; Amiri, Mehdi; Hasan, Asma; +2 Authors
Tordjman, Joshua; Mousumi Majumder; Amiri, Mehdi; Hasan, Asma; Hess, David; Peeyush Lala;
doi: 10.6084/m9.figshare.8260802.v1 , 10.6084/m9.figshare.8260802
doi: 10.6084/m9.figshare.8260802.v1 , 10.6084/m9.figshare.8260802
Figure S2. Migration, invasion and proliferation in MCF7 cells after CPEB2KD. (A) Migration and (B) invasion measured in transwells respectively at 24 and 48 h reveal significant increases in CPEB2KD cells (p
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figshare

Supplementary File 2 from Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls a key fitness trait affecting red coloration

Additional file 1 of Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids

Additional file 23 of Fluid flow exposure promotes epithelial-to-mesenchymal transition and adhesion of breast cancer cells to endothelial cells

Additional file 2: of Tumor suppressor role of cytoplasmic polyadenylation element binding protein 2 (CPEB2) in human mammary epithelial cells

Auxosporulation in Chaetoceros acadianus sp. nov. (Bacillariophyceae), a new member of the Section Compressa

Single-pulse terahertz spectroscopy monitoring sub-millisecond time dynamics at a rate of 50 kHz

Additional file 3 of Global properties of regulatory sequences are predicted by transcription factor recognition mechanisms

Additional file 12 of Biologically relevant transfer learning improves transcription factor binding prediction

Additional file 13 of Pulmonary and systemic responses to aerosolized lysate of Staphylococcus aureus and Escherichia coli in calves

Average vessel radius atlas

Supplementary File 2 from Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls a key fitness trait affecting red coloration

Additional file 1 of Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids

Additional file 23 of Fluid flow exposure promotes epithelial-to-mesenchymal transition and adhesion of breast cancer cells to endothelial cells

Additional file 2: of Tumor suppressor role of cytoplasmic polyadenylation element binding protein 2 (CPEB2) in human mammary epithelial cells

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