From a single data description file, this package generates a simple but complete RESTful web interface to a relational database, in the form of containers that run in a Docker environment. This initial version produces containers that are intended for use on the NERSC ...

The TargetID pipeline enables rapid identification and characterization of binding sites in SARS-CoV-2 proteins as well as the core chemical components with which these sites interact.

SAND2021-0565 O PRIME is a modeling framework designed for the real-time characterization and forecasting of partially observed epidemics. The method is designed to help guide medical resource allocation in the early epoch of the outbreak. Characterization is the estima...

This is software lets one explore the data released as part of the COVID-19 Open Research Dataset Challenge. It downloads and analyzes the natural language text of the data set and then creates a 2D visualization that can be used to explore it. SAND2020-12185 M Sandia N...

Background: Machine learning (ML) based risk stratification models of Electronic Health records (EHR) data may help to optimize treatment of COVID-19 patients, but are often limited by their lack of clinical interpretability and cost of laboratory tests. We develop a ML...