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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Klimeš, Petr; Drescher, Jochen; Buchori, Damayanti; Hidayat, Purnama; +5 Authors

    Fig. 3. Proventriculus of the ant genera Overbeckia (a), Calomyrmex (b), Echinopla (c) and Colobopsis (d). The darker flanges are sepals that are attached anteriorly to the tissues of the ant gut, whereas the convex light structure represents proventricular bulb that connects posteriorly to the stomodeal valve of the worker midgut. Note the posterior connection is broken here due to the removal of the structure from the gut of ant worker. The patterns reflect natural colouring of the structures. Published as part of Klimeš, Petr, Drescher, Jochen, Buchori, Damayanti, Hidayat, Purnama, Nazarreta, Rizky, Potocký, Pavel, Rimandai, Maling, Scheu, Stefan & Matos-Maraví, Pável, 2022, Uncovering cryptic diversity in the enigmatic ant genus Overbeckia and insights into the phylogeny of Camponotini (Hymenoptera:Formicidae:Formicinae), pp. 277-288 in Invertebrate Systematics 36 (6) on page 565, DOI: 10.1071/is21067, http://zenodo.org/record/6987297

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Image . 2022
    Data sources: Datacite
    ZENODO
    Image . 2022
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Image . 2022
      Data sources: Datacite
      ZENODO
      Image . 2022
      Data sources: ZENODO
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Dr. Rusdiyanto, SE,. M. Ak,. CH,. CHt;

    Capaian Pembelajaran Mata Kuliah (CPMK) Mahasiswa Mampu menjelaskan siapa Pemungut dan dan teknis menghitung PPh Pasal 4 (ayat 2) dan PPh Final lainnya Indikator Pembelajaran PPh Pasal Pasaal 4 (ayat 2) dan PPh Final lainnya 1.Pemungut dan pihak yang dipungut PPh Pasal 4 (ayat)2 2.Objek Yang Dipotong PPh 3.Pasal 4 (ayat 2); 4.Tarif, Dasar Pengenaan Pajak dan Penghitungan PPh Pasal 4 (ayat 2); 5. Contoh dan Penerapannya PERTEMUAN 13_05 JANUARY_2023_PPh Pasal 4 Ayat (2)&PPh Final Lainya-PERPAJAKAN _UWP_WIYUNG_JAM 08.00-09.30

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: Datacite
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: Datacite
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: ZENODO
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Descals, Adrià; Wich, Serge; Meijaard, Erik; Gaveau, David; +2 Authors

    The dataset contains 634 100x100 km tiles, covering areas where oil palm plantations were detected. The file 'grid.shp' contains the grid that covers the potential distribution of oil palm. The file 'grid_withOP.shp' shows the 100x100 grid squares with presence of oil palm plantations. The classified images (‘oil_palm_map’ folder, in geotiff format) are the output of the convolutional neural network based on Sentinel-1 and Sentinel-2 half-year composites. The images have a spatial resolution of 10 meters and contain three classes: [1] Industrial closed-canopy oil palm plantations, [2] Smallholder closed-canopy oil palm plantations, and [3] other land covers/uses that are not closed canopy oil palm. The file ‘Validation_points_GlobalOilPalmLayer_2019.shp’ includes the 13,495 points that were used to validate the product. Each point includes the attribute ‘Class’, which is the labelled class assigned by visual interpretation, and the attribute ‘predClass, which reflects the predicted class by the convolutional neural network. The ‘Class’ and ‘predClass’ values are the same as the raster files: [1] Industrial closed-canopy oil palm plantations, [2] Smallholder closed-canopy oil palm plantations, and [3] other land covers/uses that are not closed canopy oil palm. See article for additional information: Descals, Adrià, et al. "High-resolution global map of smallholder and industrial closed-canopy oil palm plantations." Earth System Science Data 13.3 (2021): 1211-1231. Changelog v1: - The analysis was extended to Sri Lanka, South India, and countries in Eastern Africa where oil palm can potentially grow. - The validation dataset only includes the points drawn by simple random sampling and stratified random sampling in the grid cells where the IUCN industrial layer detected oil palm. - The 'Class' and 'predClass' values in the validation dataset were reclassified with the same values as the raster images: [1] Industrial plantations, [2] Smallholder plantations, and [3] Other land covers/uses.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ PANGAEA - Data Publi...arrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Dataset . 2021
    License: CC BY
    Data sources: Datacite
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Dataset . 2021
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    PANGAEA
    Dataset . 2020
    Data sources: B2FIND
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ PANGAEA - Data Publi...arrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2021
      License: CC BY
      Data sources: Datacite
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2021
      License: CC BY
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      PANGAEA
      Dataset . 2020
      Data sources: B2FIND
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Nuryadi, Handung; Mandagi, Ixchel; Masengi, Kawilarang; Kusumi, Junko; +2 Authors

    Heteroplasmy, the presence of multiple mitochondrial DNA (mtDNA) haplotypes within cells of an individual, is caused by mutation or paternal leakage. However, heteroplasmy is usually resolved to homoplasmy within a few generations because of germ-line bottlenecks; therefore, instances of heteroplasmy are limited in nature. Here, we report heteroplasmy in the ricefish species Oryzias matanensis, endemic to Lake Matano, an ancient lake in Sulawesi Island, in which one individual was known to have many heterozygous sites in the mitochondrial NADH dehydrogenase subunit 2 (ND2) gene. In this study, we cloned the ND2 gene for some additional individuals with heterozygous sites and demonstrated that they are truly heteroplasmic. Phylogenetic analysis revealed that the extra haplotype within the heteroplasmic O. matanensis individuals clustered with haplotypes of O. marmoratus, a congeneric species inhabiting adjacent lakes. This indicated that the heteroplasmy originated from paternal leakage due to interspecific hybridisation. The extra haplotype was unique and contained two nonsynonymous substitutions. These findings demonstrate that this hybridisation-driven heteroplasmy was maintained across generations for a long time to the extent that the extra mitochondria evolved within the new host. ## Data set from Nuryadi et al. 2023 Biology Letters. The data set accompanies four Dryad data files. Uploaded: November 2023 Revised: Contact: Kazunori Yamahira (yamahira@lab.u-ryukyu.ac.jp) *** File\_01\_Fasta\_ND2\_all.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of Oryzias species endemic to the Malili Lake system, which was used for the ML phylogeny in figure 2. *** File\_02\_Fasta\_ND2\_unique.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of the 52 unique haplotypes among Oryzias species endemic to the Malili Lake system, which was used for the ML phylogeny in figure S1. *** File\_03\_Fasta\_ND2\_unique\_only\_HapB\_Mar.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of the 10 unique haplotypes from Oryzias marmoratus and the O. matanensis extra haplotype, which was used in EasyCodeML. *** File\_04\_Newick\_ND2\_unique\_only\_HapB\_Mar.txt The newick file containing a topology among the 10 unique haplotypes from Oryzias marmoratus and the O. matanensis extra haplotype, which was used in EasyCodeML.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ DRYAD; ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DRYAD; ZENODO
    Dataset . 2023
    License: CC 0
    Data sources: ZENODO; Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ DRYAD; ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DRYAD; ZENODO
      Dataset . 2023
      License: CC 0
      Data sources: ZENODO; Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Yang, Bin; Cui, Leilei; Perez-Enciso, Miguel; Traspov, Aleksei; +18 Authors

    [Results]: A deep phylogeographic division reflects the dichotomy between early domestication centers. In the core Eastern and Western domestication regions, Chinese pigs show differentiation between breeds due to geographic isolation, whereas this is less pronounced in European pigs. The inferred European origin of pigs in the Americas, Africa, and Australia reflects European expansion during the sixteenth to nineteenth centuries. Human-mediated introgression, which is due, in particular, to importing Chinese pigs into the UK during the eighteenth and nineteenth centuries, played an important role in the formation of modern pig breeds. Inbreeding levels vary markedly between populations, from almost no runs of homozygosity (ROH) in a number of Asian wild boar populations, to up to 20% of the genome covered by ROH in a number of Southern European breeds. Commercial populations show moderate ROH statistics. For domesticated pigs and wild boars in Asia and Europe, we identified highly differentiated loci that include candidate genes related to muscle and body development, central nervous system, reproduction, and energy balance, which are putatively under artificial selection. [Conclusions]: Key events related to domestication, dispersal, and mixing of pigs from different regions are reflected in the 60K SNP data, including the globalization that has recently become full circle since Chinese pig breeders in the past decades started selecting Western breeds to improve local Chinese pigs. Furthermore, signatures of ongoing and past selection, acting at different times and on different genetic backgrounds, enhance our insight in the mechanism of domestication and selection. The global diversity statistics presented here highlight concerns for maintaining agrodiversity, but also provide a necessary framework for directing genetic conservation. [Background]: Pigs were domesticated independently in Eastern and Western Eurasia early during the agricultural revolution, and have since been transported and traded across the globe. Here, we present a worldwide survey on 60K genome-wide single nucleotide polymorphism (SNP) data for 2093 pigs, including 1839 domestic pigs representing 122 local and commercial breeds, 215 wild boars, and 39 out-group suids, from Asia, Europe, America, Oceania and Africa. The aim of this study was to infer global patterns in pig domestication and diversity related to demography, migration, and selection. Usage Notes: Description_data_GSE_Global_pigs Table describing the samples. Note that the submitted data includes a few animals that were removed from the paper due to additional constraints applied in the review process. GSE_global_pigs.map PLINK MAP file, describing the SNPs used. GSE_global_pigs.ped Genotype data used in PLINK PED file format. Peer reviewed

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ NARCIS; Research@WURarrow_drop_down
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DRYAD; NARCIS; ZENODO
    Dataset . 2018
    License: CC 0
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DANS-EASY
    Dataset . 2017
    Data sources: B2FIND
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ NARCIS; Research@WURarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DRYAD; NARCIS; ZENODO
      Dataset . 2018
      License: CC 0
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DANS-EASY
      Dataset . 2017
      Data sources: B2FIND
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Authors: McLAUGHLIN, Patsy A.; Rahayu, Dwi Listyo;

    FIG. 3. — Pteropagurus spinulocarpus McLaughlin, 2007, EBISCO, stn DW 2492, New Caledonia (MNHN-Pg 7764): A, B, carpus and chela of right cheliped, dorsal view (setae omitted); C, D, carpus and chela of left chela, dorsal view (setae omitted); E, F, left chela, mesial view (setae omitted); G, right second pereopod, lateral view (setae omitted); H, right third pereopod, lateral view (setae omitted); I, dactyl of left third pereopod, mesial view; J, distal three segments of left fourth pereopod, lateral view (setae omitted); K, L, coxae and sternite of fifth pereopods, ventral view; M, N, telson, dorsal view; O, cluster of stalked protozoans from shell interior; A, C, E, G-K, M, ♂ (1.6 mm); B, D, F, L, N, ♀ (1.7 mm); O, from shell. Scale bars: 0.5 mm. Published as part of McLAUGHLIN, Patsy A. & Rahayu, Dwi Listyo, 2008, Pteropagurus and Catapagurus (Decapoda, Anomura, Paguridae): resource sharing or "any port in a storm"?, pp. 899-916 in Zoosystema 30 (4) on page 907, DOI: 10.5281/zenodo.4525838

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    Authors: Dr. Rusdiyanto, SE,. M. Ak,. CH,. CHt;

    Plagiram Case Study of Indonesia: R&D Affected by the Masculine Face Size of a Male CEO

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    Because this instructional material will be used for teaching in some way, Youtube will be used because it offers authentic and can allow learners to review and rebuild concepts for national sustainable education with a humanistic national standard. Students will be able to understand further educational programs, essential thinking systems, and standards aspects by watching the video transcriptions in the table below. https://dx.doi.org/10.21227/0aka-6106 https://ieee-dataport.org/documents/transcriptions-youtube-teaching-complements-foundation-education-indonesias-view-elements

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    Authors: Rezki Ashriyana Sulistiobudi; Anissa Lestari Kadiyono;

    The data brief of our research (psychological capital, parent-student congruences and employability)

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  • Authors: Prasetyo, Teguh Budi;
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    Authors: Klimeš, Petr; Drescher, Jochen; Buchori, Damayanti; Hidayat, Purnama; +5 Authors

    Fig. 3. Proventriculus of the ant genera Overbeckia (a), Calomyrmex (b), Echinopla (c) and Colobopsis (d). The darker flanges are sepals that are attached anteriorly to the tissues of the ant gut, whereas the convex light structure represents proventricular bulb that connects posteriorly to the stomodeal valve of the worker midgut. Note the posterior connection is broken here due to the removal of the structure from the gut of ant worker. The patterns reflect natural colouring of the structures. Published as part of Klimeš, Petr, Drescher, Jochen, Buchori, Damayanti, Hidayat, Purnama, Nazarreta, Rizky, Potocký, Pavel, Rimandai, Maling, Scheu, Stefan & Matos-Maraví, Pável, 2022, Uncovering cryptic diversity in the enigmatic ant genus Overbeckia and insights into the phylogeny of Camponotini (Hymenoptera:Formicidae:Formicinae), pp. 277-288 in Invertebrate Systematics 36 (6) on page 565, DOI: 10.1071/is21067, http://zenodo.org/record/6987297

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    Authors: Dr. Rusdiyanto, SE,. M. Ak,. CH,. CHt;

    Capaian Pembelajaran Mata Kuliah (CPMK) Mahasiswa Mampu menjelaskan siapa Pemungut dan dan teknis menghitung PPh Pasal 4 (ayat 2) dan PPh Final lainnya Indikator Pembelajaran PPh Pasal Pasaal 4 (ayat 2) dan PPh Final lainnya 1.Pemungut dan pihak yang dipungut PPh Pasal 4 (ayat)2 2.Objek Yang Dipotong PPh 3.Pasal 4 (ayat 2); 4.Tarif, Dasar Pengenaan Pajak dan Penghitungan PPh Pasal 4 (ayat 2); 5. Contoh dan Penerapannya PERTEMUAN 13_05 JANUARY_2023_PPh Pasal 4 Ayat (2)&PPh Final Lainya-PERPAJAKAN _UWP_WIYUNG_JAM 08.00-09.30

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    Authors: Descals, Adrià; Wich, Serge; Meijaard, Erik; Gaveau, David; +2 Authors

    The dataset contains 634 100x100 km tiles, covering areas where oil palm plantations were detected. The file 'grid.shp' contains the grid that covers the potential distribution of oil palm. The file 'grid_withOP.shp' shows the 100x100 grid squares with presence of oil palm plantations. The classified images (‘oil_palm_map’ folder, in geotiff format) are the output of the convolutional neural network based on Sentinel-1 and Sentinel-2 half-year composites. The images have a spatial resolution of 10 meters and contain three classes: [1] Industrial closed-canopy oil palm plantations, [2] Smallholder closed-canopy oil palm plantations, and [3] other land covers/uses that are not closed canopy oil palm. The file ‘Validation_points_GlobalOilPalmLayer_2019.shp’ includes the 13,495 points that were used to validate the product. Each point includes the attribute ‘Class’, which is the labelled class assigned by visual interpretation, and the attribute ‘predClass, which reflects the predicted class by the convolutional neural network. The ‘Class’ and ‘predClass’ values are the same as the raster files: [1] Industrial closed-canopy oil palm plantations, [2] Smallholder closed-canopy oil palm plantations, and [3] other land covers/uses that are not closed canopy oil palm. See article for additional information: Descals, Adrià, et al. "High-resolution global map of smallholder and industrial closed-canopy oil palm plantations." Earth System Science Data 13.3 (2021): 1211-1231. Changelog v1: - The analysis was extended to Sri Lanka, South India, and countries in Eastern Africa where oil palm can potentially grow. - The validation dataset only includes the points drawn by simple random sampling and stratified random sampling in the grid cells where the IUCN industrial layer detected oil palm. - The 'Class' and 'predClass' values in the validation dataset were reclassified with the same values as the raster images: [1] Industrial plantations, [2] Smallholder plantations, and [3] Other land covers/uses.

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    ZENODO
    Dataset . 2021
    License: CC BY
    Data sources: ZENODO
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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: ZENODO
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    PANGAEA
    Dataset . 2020
    Data sources: B2FIND
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      ZENODO
      Dataset . 2021
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2021
      License: CC BY
      Data sources: ZENODO
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: ZENODO
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      PANGAEA
      Dataset . 2020
      Data sources: B2FIND
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    Authors: Nuryadi, Handung; Mandagi, Ixchel; Masengi, Kawilarang; Kusumi, Junko; +2 Authors

    Heteroplasmy, the presence of multiple mitochondrial DNA (mtDNA) haplotypes within cells of an individual, is caused by mutation or paternal leakage. However, heteroplasmy is usually resolved to homoplasmy within a few generations because of germ-line bottlenecks; therefore, instances of heteroplasmy are limited in nature. Here, we report heteroplasmy in the ricefish species Oryzias matanensis, endemic to Lake Matano, an ancient lake in Sulawesi Island, in which one individual was known to have many heterozygous sites in the mitochondrial NADH dehydrogenase subunit 2 (ND2) gene. In this study, we cloned the ND2 gene for some additional individuals with heterozygous sites and demonstrated that they are truly heteroplasmic. Phylogenetic analysis revealed that the extra haplotype within the heteroplasmic O. matanensis individuals clustered with haplotypes of O. marmoratus, a congeneric species inhabiting adjacent lakes. This indicated that the heteroplasmy originated from paternal leakage due to interspecific hybridisation. The extra haplotype was unique and contained two nonsynonymous substitutions. These findings demonstrate that this hybridisation-driven heteroplasmy was maintained across generations for a long time to the extent that the extra mitochondria evolved within the new host. ## Data set from Nuryadi et al. 2023 Biology Letters. The data set accompanies four Dryad data files. Uploaded: November 2023 Revised: Contact: Kazunori Yamahira (yamahira@lab.u-ryukyu.ac.jp) *** File\_01\_Fasta\_ND2\_all.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of Oryzias species endemic to the Malili Lake system, which was used for the ML phylogeny in figure 2. *** File\_02\_Fasta\_ND2\_unique.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of the 52 unique haplotypes among Oryzias species endemic to the Malili Lake system, which was used for the ML phylogeny in figure S1. *** File\_03\_Fasta\_ND2\_unique\_only\_HapB\_Mar.fas The fasta file containing mitochondrial ND2 sequences (1053 bp) of the 10 unique haplotypes from Oryzias marmoratus and the O. matanensis extra haplotype, which was used in EasyCodeML. *** File\_04\_Newick\_ND2\_unique\_only\_HapB\_Mar.txt The newick file containing a topology among the 10 unique haplotypes from Oryzias marmoratus and the O. matanensis extra haplotype, which was used in EasyCodeML.

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    DRYAD; ZENODO
    Dataset . 2023
    License: CC 0
    Data sources: ZENODO; Datacite
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      DRYAD; ZENODO
      Dataset . 2023
      License: CC 0
      Data sources: ZENODO; Datacite
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    Authors: Yang, Bin; Cui, Leilei; Perez-Enciso, Miguel; Traspov, Aleksei; +18 Authors

    [Results]: A deep phylogeographic division reflects the dichotomy between early domestication centers. In the core Eastern and Western domestication regions, Chinese pigs show differentiation between breeds due to geographic isolation, whereas this is less pronounced in European pigs. The inferred European origin of pigs in the Americas, Africa, and Australia reflects European expansion during the sixteenth to nineteenth centuries. Human-mediated introgression, which is due, in particular, to importing Chinese pigs into the UK during the eighteenth and nineteenth centuries, played an important role in the formation of modern pig breeds. Inbreeding levels vary markedly between populations, from almost no runs of homozygosity (ROH) in a number of Asian wild boar populations, to up to 20% of the genome covered by ROH in a number of Southern European breeds. Commercial populations show moderate ROH statistics. For domesticated pigs and wild boars in Asia and Europe, we identified highly differentiated loci that include candidate genes related to muscle and body development, central nervous system, reproduction, and energy balance, which are putatively under artificial selection. [Conclusions]: Key events related to domestication, dispersal, and mixing of pigs from different regions are reflected in the 60K SNP data, including the globalization that has recently become full circle since Chinese pig breeders in the past decades started selecting Western breeds to improve local Chinese pigs. Furthermore, signatures of ongoing and past selection, acting at different times and on different genetic backgrounds, enhance our insight in the mechanism of domestication and selection. The global diversity statistics presented here highlight concerns for maintaining agrodiversity, but also provide a necessary framework for directing genetic conservation. [Background]: Pigs were domesticated independently in Eastern and Western Eurasia early during the agricultural revolution, and have since been transported and traded across the globe. Here, we present a worldwide survey on 60K genome-wide single nucleotide polymorphism (SNP) data for 2093 pigs, including 1839 domestic pigs representing 122 local and commercial breeds, 215 wild boars, and 39 out-group suids, from Asia, Europe, America, Oceania and Africa. The aim of this study was to infer global patterns in pig domestication and diversity related to demography, migration, and selection. Usage Notes: Description_data_GSE_Global_pigs Table describing the samples. Note that the submitted data includes a few animals that were removed from the paper due to additional constraints applied in the review process. GSE_global_pigs.map PLINK MAP file, describing the SNPs used. GSE_global_pigs.ped Genotype data used in PLINK PED file format. Peer reviewed

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    DRYAD; NARCIS; ZENODO
    Dataset . 2018
    License: CC 0
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    DANS-EASY
    Dataset . 2017
    Data sources: B2FIND
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DRYAD; NARCIS; ZENODO
      Dataset . 2018
      License: CC 0
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      DANS-EASY
      Dataset . 2017
      Data sources: B2FIND
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    Authors: McLAUGHLIN, Patsy A.; Rahayu, Dwi Listyo;

    FIG. 3. — Pteropagurus spinulocarpus McLaughlin, 2007, EBISCO, stn DW 2492, New Caledonia (MNHN-Pg 7764): A, B, carpus and chela of right cheliped, dorsal view (setae omitted); C, D, carpus and chela of left chela, dorsal view (setae omitted); E, F, left chela, mesial view (setae omitted); G, right second pereopod, lateral view (setae omitted); H, right third pereopod, lateral view (setae omitted); I, dactyl of left third pereopod, mesial view; J, distal three segments of left fourth pereopod, lateral view (setae omitted); K, L, coxae and sternite of fifth pereopods, ventral view; M, N, telson, dorsal view; O, cluster of stalked protozoans from shell interior; A, C, E, G-K, M, ♂ (1.6 mm); B, D, F, L, N, ♀ (1.7 mm); O, from shell. Scale bars: 0.5 mm. Published as part of McLAUGHLIN, Patsy A. & Rahayu, Dwi Listyo, 2008, Pteropagurus and Catapagurus (Decapoda, Anomura, Paguridae): resource sharing or "any port in a storm"?, pp. 899-916 in Zoosystema 30 (4) on page 907, DOI: 10.5281/zenodo.4525838