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1,892 research outcomes, page 1 of 190
  • software . 2021
    Open Source
    Authors:
    Kubicek-Sutherland, Jessica; Yusim, Karina; Theiler, James; Foley, Brian; Stromberg, Zachary; Gans, Jason;
    Publisher: DOE CODE

    Here we have developed a pipeline for the fast evaluation of viral emerging risks (FEVER) that generates primer and probe sets for genetically diverse viruses. The goal of probe design is to produce a short nucleotide sequence (called a K-mer, as it is of length K) that...

  • software . 2021
    Open Source
    Authors:
    Central, PNNL Developer; Saldanha, Emily; Panapitiya, Gihan;
    Publisher: DOE CODE

    We are using existing deep learning modeling architectures and data representation techniques, but we are consolidating the methods into a single set of training and evaluation scripts. Additionally, we test and evaluate the performance of the models on the largest set ...

  • software . 2021
    Open Source Python
    Authors:
    Praggastis, Brenda; Central, PNNL Developer; Brown, Davis; Shapiro, Madelyn;
    Publisher: DOE CODE

    Python library for analyzing the internal structure of deep neural networks.

  • software . 2021
    Open Source Fortran
    Authors:
    Alemany, M. M. G.; Biller, Ariel J.; Burdick, Russ; Chelikowsky, James R.; Jain, Manish; Kim, Hanchul; Kronik, Leeor; Kwak, Hyunwook; Lena, Charles M.; Liao, Timothy; ...
    Publisher: DOE CODE

    PARSEC is a computer code that solves the Kohn-Sham equations by expressing electron wave-functions directly in real space, without the use of explicit basis sets. It uses norm-conserving pseudopotentials (Troullier-Martins and other varieties). It is designed for ab in...

  • software . 2021
    Open Source Python
    Authors:
    Rossol, Michael; Grant, Buster;
    Publisher: DOE CODE

    Cloud File System Utilities is a generalized file-system handler that will dynamically determine if files are local or on the cloud (currently AWS) and perform basic file-system operations.

  • software . 2021
    Restricted
    Authors:
    McCormick, Patrick; Shipmen, Galen; Prajapati, Nirmal; Pietarila, Graham; Wu, Wei; Aiken, Alex; Bauer, Mike; Treichler, Sean; Slaughter, Elliot; Lee, Wonchan;
    Publisher: DOE CODE

    This disclosure covers LANLs contributions of source code to the already open source Legion Programming System. This covers example codes, contributions to the systems base source code, new features, bug fixes, associated documentation, and benchmarks. Legion is a data-...

  • software . 2021
    Open Source
    Authors:
    Baily, Scott;
    Publisher: DOE CODE

    lvPortDriver and the lvPortDriver virtual library are functions that enable LabVIEW code to run an EPICS (Experimental Physics and Industrial Control System) IOC (Input/Output Controller), and communicate with it. The EPICS records interface just as they would with any ...

  • software . 2021
    Restricted
    Authors:
    Greenburg, Hugh;
    Publisher: DOE CODE

    The Scalable Unusual Message Detector (SUD) is a scalable software program for finding anomalous log messages on a single machine or cluster in near real time. This program is able to detect unusual messages by turning the text into sets of ngrams, which are multiple se...

  • software . 2021
    Restricted
    Authors:
    Ghennupati, Gopinath; Carrillo Cabada, Hector; Skau, Erik; Alexandrov, Boian; Djidjev, Hristo;
    Publisher: DOE CODE

    Singular value decomposition (SVD) is a matrix factorization widely used for dimensionality reduction, data analytics, information retrieval and unsupervised learning. In the SVDs applications for big-data, usually, only the singular values are calculated. However, new ...

  • software . 2021
    Restricted
    Authors:
    Gao, Kai; Huang, Lianjie;
    Publisher: DOE CODE

    We develop a lightweight, easy-to-use plotting package based on Python and matplotlib for scalar data visualization. The package contains eight plotting functions that can efficiently and conveniently render one-dimensional (1D), two-dimensional (2D), and three-dimensio...

1,892 research outcomes, page 1 of 190