Quick search
Advanced search in
Field to searchTerm
Add rule
Download Results
96 research outcomes, page 1 of 10
  • software . 2021
    Open Access English
    Authors:
    Gandon, Sylvain; Lion, Sébastien;
    Publisher: Zenodo

    This deposit contains two Mathematica notebooks and R scripts allowing users to reproduce the simulations and figures in our article "Targeted vaccination and the speed of SARS-CoV-2 adaptation". See README files for more details. S. Gandon & S. Lion

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    István Horváth; Szilard N. Fejer;
    Persistent Identifiers
    Publisher: Zenodo

    A simple Python Flask application for editing and managing SARS-CoV-2 sequencing metadata and data. The goal of the project is to help users with the upload of SARS-CoV-2 sequencing data the following repositories: - EpiCov from GISAID - repositories hosted by ENA - SRA...

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Horváth, István; Fejer, Szilard N.;
    Persistent Identifiers
    Publisher: Zenodo

    A simple Python Flask application for editing and managing SARS-CoV-2 sequencing metadata and data. The goal of the project is to help users with the upload of SARS-CoV-2 sequencing data the following repositories: - EpiCov from GISAID - repositories hosted by ENA - SRA...

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Ray, Evan L.;
    Publisher: Zenodo

    GitHub repository with code and data for COVID-19 ensemble methods manuscript

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Chang, Sheryl L.; Harding, Nathan; Zachreson, Cameron; Cliff, Oliver M.; Prokopenko, Mikhail;
    Publisher: Zenodo

    The software implements an agent-based model for a fine-grained computational simulation of the COVID-19 pandemic in Australia. This model is calibrated to reproduce several features of COVID-19 transmission, including its age-dependent epidemiological characteristics. ...

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Tupper, Paul; Colijn, Caroline; Pai, Shraddha; COVID Schools Canada;
    Publisher: Zenodo

    Software and data associated with the paper "COVID-19 clusters in schools: frequency, size, and transmission rates from crowdsourced exposure reports"

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Shirley, Ben C; Eliseos J Mucaki; Rogan, Peter K;
    Publisher: Zenodo

    This is the software archive for the research article "Likely community transmission of COVID-19 infections at neighboring, persistent hotspots in Ontario, Canada" (Mucaki EJ, Shirley BC and Rogan PK. F1000Research 2021, 10:1312, DOI: 10.12688/f1000research.75...

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Ivan Aksamentov; Cornelius Roemer; Emma B Hodcroft; Richard A. Neher;
    Publisher: Zenodo

    The variants of concern (VoCs) of SARS-CoV-2 have highlighted the need for a global molecular surveillance of pathogens via whole genome sequencing. Such sequencing, for SARS-CoV-2 and other pathogens, is performed by an ever increasing number of labs across the globe, ...

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Marziano Valentina; Guzzetta Giorgio; Mammone Alessia; Riccardo Flavia; Poletti Piero; Trentini Filippo; Manica Mattia; Siddu Andrea; Bella Antonino; Stefanelli Paola; ...
    Publisher: Zenodo

    Code and data used in the journal article The effect of COVID-19 vaccination in Italy and perspectives for “living with the virus”

    Add to ORCIDorcid
  • software . 2021
    Open Access English
    Authors:
    Apostolos Kritikos;
    Publisher: Zenodo

    CHANGELOG: 32 datasets available in total. Since version 3.0.0, 4 new datasets added. Aggregation scripts re-factored to update some repositories with changes on their URLs and to include the new datasets. The documentation of the data is now organized on a Google Docu...

    Add to ORCIDorcid
96 research outcomes, page 1 of 10