Supporting material for the study: "Combining statistical and mechanistic models to unravel the drivers of mortality within a rear-edge beech population." Authors: Cathleen Petit-Cailleux1, Hendrik Davi1, François Lefèvre1, Joseph Garrigue2, Jean-André Magdalou2, Christophe Hurson2,3, Elodie Magnanou2,4, and Sylvie Oddou-Muratorio1. Adresses 1INRA, UR 629 Ecologie des Forêts Méditerranéennes, URFM, Avignon, France 2Réserve Naturelle Nationale de la Forêt de la Massane, France 3Fédération des Réserves Naturelles Catalanes, Prades, France 4Sorbonne Université, CNRS, Biologie Intégrative des Organismes Marins, BIOM, F-66650 Banyuls-sur-Mer, France ORCID: Cathleen Petit-Cailleux: https://orcid.org/0000-0001-7714-6583 François Lefèvre : https://orcid.org/0000-0003-2242-7251 Sylvie Oddou-Muratorio https://orcid.org/0000-0003-2374-8313 ------------- Raw data of the Table_Massane_moratlity_trees.csv and climate can be obtained from Joseph Garrigue, Jean-André Magdalou and Christophe Hurson. The inventories files and daily climate are the input dataset to run CASTANEA models. All details are provided in the article.
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Near Eastern Neolithic farmers introduced several species of domestic plants and animals as they dispersed into Europe. Dogs were the only domestic species present in both Europe and the Near East prior to the Neolithic. Here, we assessed whether early Near Eastern dogs possessed a unique mitochondrial lineage that differentiated them from Mesolithic European populations. We then analysed mitochondrial DNA sequences from 99 ancient European and Near-Eastern dogs spanning the Upper Palaeolithic to the Bronze Age to assess if incoming farmers brought Near Eastern dogs with them, or instead primarily adopted indigenous European dogs after they arrived. Our results show that European pre-Neolithic dogs all possessed the mitochondrial haplogroup C, and that the Neolithic and Post-Neolithic dogs associated with farmers from Southeastern Europe mainly possessed haplogroup D. Thus, the appearance of haplogroup D most likely resulted from the dissemination of dogs from the Near East into Europe. In Western and Northern Europe, the turnover is incomplete and C haplogroup persists well into the Chalcolithic at least. These results suggest that dogs were an integral component of the Neolithic farming package and a mitochondrial lineage associated with the Near East was introduced into Europe alongside pigs, cows, sheep, and goats. It got diluted into the native dog population when reaching the Western and Northern margins of Europe. modern and ancient dog mt sequence (HVR1)all-sequence file.fst
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Supporting material for the study: "Combining statistical and mechanistic models to unravel the drivers of mortality within a rear-edge beech population." Authors: Cathleen Petit-Cailleux1, Hendrik Davi1, François Lefèvre1, Joseph Garrigue2, Jean-André Magdalou2, Christophe Hurson2,3, Elodie Magnanou2,4, and Sylvie Oddou-Muratorio1. Adresses 1INRA, UR 629 Ecologie des Forêts Méditerranéennes, URFM, Avignon, France 2Réserve Naturelle Nationale de la Forêt de la Massane, France 3Fédération des Réserves Naturelles Catalanes, Prades, France 4Sorbonne Université, CNRS, Biologie Intégrative des Organismes Marins, BIOM, F-66650 Banyuls-sur-Mer, France ORCID: Cathleen Petit-Cailleux: https://orcid.org/0000-0001-7714-6583 François Lefèvre : https://orcid.org/0000-0003-2242-7251 Sylvie Oddou-Muratorio https://orcid.org/0000-0003-2374-8313 ------------- Raw data of the Table_Massane_moratlity_trees.csv and climate can be obtained from Joseph Garrigue, Jean-André Magdalou and Christophe Hurson. The inventories files and daily climate are the input dataset to run CASTANEA models. All details are provided in the article.
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Near Eastern Neolithic farmers introduced several species of domestic plants and animals as they dispersed into Europe. Dogs were the only domestic species present in both Europe and the Near East prior to the Neolithic. Here, we assessed whether early Near Eastern dogs possessed a unique mitochondrial lineage that differentiated them from Mesolithic European populations. We then analysed mitochondrial DNA sequences from 99 ancient European and Near-Eastern dogs spanning the Upper Palaeolithic to the Bronze Age to assess if incoming farmers brought Near Eastern dogs with them, or instead primarily adopted indigenous European dogs after they arrived. Our results show that European pre-Neolithic dogs all possessed the mitochondrial haplogroup C, and that the Neolithic and Post-Neolithic dogs associated with farmers from Southeastern Europe mainly possessed haplogroup D. Thus, the appearance of haplogroup D most likely resulted from the dissemination of dogs from the Near East into Europe. In Western and Northern Europe, the turnover is incomplete and C haplogroup persists well into the Chalcolithic at least. These results suggest that dogs were an integral component of the Neolithic farming package and a mitochondrial lineage associated with the Near East was introduced into Europe alongside pigs, cows, sheep, and goats. It got diluted into the native dog population when reaching the Western and Northern margins of Europe. modern and ancient dog mt sequence (HVR1)all-sequence file.fst
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