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  • Discovery and Explanation of Event-Driven Defects with History-Aware Incorrectness Logic Artifact (Anonymous Review)

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Embargo end date: 24 Apr 2024 English Publisher:Zenodo
    Authors: Anonymous, Anonymous;

    doi: 10.5281/zenodo.11057413 , 10.5281/zenodo.11057414

    This is the files for the artifact of the paper under submission "Discovery and Explanation of Event-Driven Defects with History-Aware Incorrectness Logic".

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2024
    License: CC BY
    Data sources: ZENODO; Datacite
    ZENODO
    Software . 2024
    License: CC BY
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2024
      License: CC BY
      Data sources: ZENODO; Datacite
      ZENODO
      Software . 2024
      License: CC BY
      Data sources: Datacite
      Claim

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  • jssobolik/covid19-fomite-qmra-model: First release of SARS-CoV-2 fomite QMRA model code

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Sobolik, Julia S;

    doi: 10.5281/zenodo.5904276 , 10.5281/zenodo.5904275

    This is the first release of the SARS-CoV-2 fomite QMRA model code.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2022
    Data sources: Datacite
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Software . 2022
    Data sources: ZENODO; Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2022
      Data sources: Datacite
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2022
      Data sources: ZENODO; Datacite
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  • Reproduction Package for "A Symbolic Representation for Probabilistic Dynamic Epistemic Logic" (AAMAS 2022)

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Sébastien Gamblin; Alexandre Niveau; Maroua Bouzid;

    doi: 10.5281/zenodo.5966036

    This package contains all code and instructions necessary to reproduce the experiments of the AAMAS 2022 paper ���A Symbolic Representation for Probabilistic Dynamic Epistemic Logic��� by Gamblin et al. The code is a Python framework for doing symbolic model checking on the Probabilistic Dynamic Epistemic Logic (PDEL).

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Software . 2022
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Software . 2022
    License: CC BY
    Data sources: ZENODO; Datacite
    Claim

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      ZENODO
      Software . 2022
      License: CC BY
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2022
      License: CC BY
      Data sources: ZENODO; Datacite
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  • bgctw/REddyProc: REddyProc 1.3.3

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Thomas Wutzler; Thomas Wutzler; mircomigliavacca;

    doi: 10.5281/zenodo.1171247 , 10.5281/zenodo.10572005

    Fixed bug in plotting daily sums, where default scale (gC / day) was of by a factor nRecInDays. Plotting daily sums: Uncertainty computation conservatively assumes fully correlated errors rather than fully independent errors Provide argument isSplitDatetime to fWriteDataframeToFile to write files consistent with the REddyProc web tool. Implement experimental version of Vekuri23 lookup-table variant of gapfilling test breakpoint in Barr13 by more powerful pscore.test (Muggeo 2016) include mlegp dependency again - its on CRAN again

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2024
    License: CC BY
    Data sources: ZENODO
    ZENODO
    Software . 2024
    License: CC BY
    Data sources: Datacite
    Claim

    This Research product is the result of merged Research products in OpenAIRE.

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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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      ZENODO
      Software . 2024
      License: CC BY
      Data sources: ZENODO
      ZENODO
      Software . 2024
      License: CC BY
      Data sources: Datacite
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      This Research product is the result of merged Research products in OpenAIRE.

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  • ksolmundson/Runs_of_Homozygosity: Runs_of_Homozygosity

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Ksolmundson;

    doi: 10.5281/zenodo.6812225 , 10.5281/zenodo.6812224

    Annotated code for trimming and mapping to a reference genome, and conducting ROH analyses on BAM files (with ROHan) and on a grouped VCF (with PLINK).

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2022
    Data sources: Datacite
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Software . 2022
    Data sources: ZENODO; Datacite
    ZENODO
    Software . 2022
    Data sources: ZENODO
    Claim

    This Research product is the result of merged Research products in OpenAIRE.

    You have already added works in your ORCID record related to the merged Research product.
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    citations0
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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      ZENODO
      Software . 2022
      Data sources: Datacite
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2022
      Data sources: ZENODO; Datacite
      ZENODO
      Software . 2022
      Data sources: ZENODO
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  • mkweskin/schultzetal_coev_ant_fungus: Code used in accepted manuscript

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Matthew Kweskin;

    doi: 10.5281/zenodo.12745440 , 10.5281/zenodo.12745441

    Code version after submission, review, and revision.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2024
    License: CC BY
    Data sources: ZENODO
    ZENODO
    Software . 2024
    License: CC BY
    Data sources: Datacite
    ZENODO
    Software . 2024
    License: CC BY
    Data sources: Datacite
    Claim

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      ZENODO
      Software . 2024
      License: CC BY
      Data sources: ZENODO
      ZENODO
      Software . 2024
      License: CC BY
      Data sources: Datacite
      ZENODO
      Software . 2024
      License: CC BY
      Data sources: Datacite
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  • Demographic projection of speaker numbers and dormancy risks of Canadian Indigenous languages in the year 2101

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2023Publisher:Zenodo
    Authors: Boissonneault, Michaël;

    doi: 10.5281/zenodo.10210450 , 10.5281/zenodo.10210451

    UNESCO launched last year the International Decade of Indigenous Languages to draw attention to the impending loss of up to half of the world's linguistic diversity. However, the likely trajectories of endangered languages in terms of speaker numbers and dormancy risks remain largely unknown. Here, we use census data and demographic projection to provide probabilistic estimates of the likely trajectories of 27 Canadian Indigenous languages during the period 2001-2101. Our model foresees decreases in population sizes of 50 percent or more in eighteen languages and non-zero dormancy risks in ten languages. Our approach reveals the magnitude of the linguistic diversity crisis and shows the power of demographic projection for evaluating the vitality of Indigenous languages worldwide.

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    ZENODO
    Software . 2023
    License: CC BY
    Data sources: ZENODO
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    ZENODO
    Software . 2023
    License: CC BY
    Data sources: Datacite; ZENODO
    ZENODO
    Software . 2023
    License: CC BY
    Data sources: Datacite
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      ZENODO
      Software . 2023
      License: CC BY
      Data sources: ZENODO
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      ZENODO
      Software . 2023
      License: CC BY
      Data sources: Datacite; ZENODO
      ZENODO
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      License: CC BY
      Data sources: Datacite
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  • Minet, a webmining CLI tool & library for python.

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2023 English Publisher:Zenodo
    Authors: Guillaume Plique; Pauline Breteau; Jules Farjas; Héloïse Théro; +3 Authors

    doi: 10.5281/zenodo.8038876

    A webmining CLI tool & library for python.

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  • Tissue miner

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:The Francis Crick Institute
    Authors: Nicolas Tapon (7559015);

    doi: 10.25418/crick.18334337 , 10.25418/crick.18334337.v1

    Tissue_miner_version_used_for_analysis contains the version of Tissue Miner used for analysis.

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  • JianhaiChen/GlobalPigGenome: Independent evolution and domestication of South Asian wild boar

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Jianhai Jay Chen;

    doi: 10.5281/zenodo.10677014

    version test

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  • Discovery and Explanation of Event-Driven Defects with History-Aware Incorrectness Logic Artifact (Anonymous Review)

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Embargo end date: 24 Apr 2024 English Publisher:Zenodo
    Authors: Anonymous, Anonymous;

    doi: 10.5281/zenodo.11057413 , 10.5281/zenodo.11057414

    This is the files for the artifact of the paper under submission "Discovery and Explanation of Event-Driven Defects with History-Aware Incorrectness Logic".

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  • jssobolik/covid19-fomite-qmra-model: First release of SARS-CoV-2 fomite QMRA model code

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Sobolik, Julia S;

    doi: 10.5281/zenodo.5904276 , 10.5281/zenodo.5904275

    This is the first release of the SARS-CoV-2 fomite QMRA model code.

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  • Reproduction Package for "A Symbolic Representation for Probabilistic Dynamic Epistemic Logic" (AAMAS 2022)

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Sébastien Gamblin; Alexandre Niveau; Maroua Bouzid;

    doi: 10.5281/zenodo.5966036

    This package contains all code and instructions necessary to reproduce the experiments of the AAMAS 2022 paper ���A Symbolic Representation for Probabilistic Dynamic Epistemic Logic��� by Gamblin et al. The code is a Python framework for doing symbolic model checking on the Probabilistic Dynamic Epistemic Logic (PDEL).

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  • bgctw/REddyProc: REddyProc 1.3.3

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Thomas Wutzler; Thomas Wutzler; mircomigliavacca;

    doi: 10.5281/zenodo.1171247 , 10.5281/zenodo.10572005

    Fixed bug in plotting daily sums, where default scale (gC / day) was of by a factor nRecInDays. Plotting daily sums: Uncertainty computation conservatively assumes fully correlated errors rather than fully independent errors Provide argument isSplitDatetime to fWriteDataframeToFile to write files consistent with the REddyProc web tool. Implement experimental version of Vekuri23 lookup-table variant of gapfilling test breakpoint in Barr13 by more powerful pscore.test (Muggeo 2016) include mlegp dependency again - its on CRAN again

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  • ksolmundson/Runs_of_Homozygosity: Runs_of_Homozygosity

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:Zenodo
    Authors: Ksolmundson;

    doi: 10.5281/zenodo.6812225 , 10.5281/zenodo.6812224

    Annotated code for trimming and mapping to a reference genome, and conducting ROH analyses on BAM files (with ROHan) and on a grouped VCF (with PLINK).

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  • mkweskin/schultzetal_coev_ant_fungus: Code used in accepted manuscript

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Matthew Kweskin;

    doi: 10.5281/zenodo.12745440 , 10.5281/zenodo.12745441

    Code version after submission, review, and revision.

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  • Demographic projection of speaker numbers and dormancy risks of Canadian Indigenous languages in the year 2101

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2023Publisher:Zenodo
    Authors: Boissonneault, Michaël;

    doi: 10.5281/zenodo.10210450 , 10.5281/zenodo.10210451

    UNESCO launched last year the International Decade of Indigenous Languages to draw attention to the impending loss of up to half of the world's linguistic diversity. However, the likely trajectories of endangered languages in terms of speaker numbers and dormancy risks remain largely unknown. Here, we use census data and demographic projection to provide probabilistic estimates of the likely trajectories of 27 Canadian Indigenous languages during the period 2001-2101. Our model foresees decreases in population sizes of 50 percent or more in eighteen languages and non-zero dormancy risks in ten languages. Our approach reveals the magnitude of the linguistic diversity crisis and shows the power of demographic projection for evaluating the vitality of Indigenous languages worldwide.

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  • Minet, a webmining CLI tool & library for python.

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2023 English Publisher:Zenodo
    Authors: Guillaume Plique; Pauline Breteau; Jules Farjas; Héloïse Théro; +3 Authors

    doi: 10.5281/zenodo.8038876

    A webmining CLI tool & library for python.

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  • Tissue miner

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2022Publisher:The Francis Crick Institute
    Authors: Nicolas Tapon (7559015);

    doi: 10.25418/crick.18334337 , 10.25418/crick.18334337.v1

    Tissue_miner_version_used_for_analysis contains the version of Tissue Miner used for analysis.

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    License: CC BY
    Data sources: Bielefeld Academic Search Engine (BASE)
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      Software . 2022
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  • JianhaiChen/GlobalPigGenome: Independent evolution and domestication of South Asian wild boar

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    integration_instructionsResearch softwarekeyboard_double_arrow_right Software 2024Publisher:Zenodo
    Authors: Jianhai Jay Chen;

    doi: 10.5281/zenodo.10677014

    version test

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