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  • Open Access English
    Authors: 
    Laura Rimell; Thomas Lippincott; Karin Verspoor; Helen L. Johnson; Anna Korhonen;
    Publisher: Elsevier Inc.
    Project: UKRI | Lexical Acquisition for t... (EP/G051070/1)

    Background: Biomedical natural language processing (NLP) applications that have access to detailed resources about the linguistic characteristics of biomedical language demonstrate improved performance on tasks such as relation extraction and syntactic or semantic parsi...

  • Open Access English
    Authors: 
    Windhager, Florian; Salisu, Saminu; Schreder, Günther; Mayr, Eva;
    Publisher: Open Library of Humanities
    Project: FWF | Towards Integrated Mental... (P 28363)

    In addition to providing pleasant and stimulating experiences, complex cultural collections can require significant amounts of cognitive work on the part of visitors. Whether collections are situated in physical spaces or presented via web-based interfaces, the sheer ri...

  • Open Access English
    Authors: 
    Brinken, Helene; Kuchma, Iryna; Kalaitzi, Vaso; Davidson, Joy; Pontika, Nancy; Cancellieri, Matteo; Correia, Antonia; Carvalho, Jose; Melero, Reme; Kastelic, Damjana; +7 more
    Countries: Germany, Portugal, Spain
    Project: EC | FOSTER Plus (741839)

    To foster responsible research and innovation, research communities, institutions, and funders are shifting their practices and requirements towards Open Science. Open Science skills are becoming increasingly essential for researchers. Indeed general awareness of Open S...

  • Open Access English
    Authors: 
    Duarte, Afonso M S; Psomopoulos, Fotis E; Blanchet, Christophe; Bonvin, Alexandre M J J; Corpas, Manuel; Franc, Alain; Jimenez, Rafael C; de Lucas, Jesus M; Nyrönen, Tommi; Sipos, Gergely; +3 more
    Publisher: HAL CCSD
    Countries: Netherlands, Spain, France
    Project: WT , AKA | ELIXIR - Data for Life Eu... (273655), EC | WENMR (261572), EC | BIOMEDBRIDGES (284209), FCT | EXPL/BBB-BEP/1356/2013 (EXPL/BBB-BEP/1356/2013), FCT | SFRH/BPD/78075/2011 (SFRH/BPD/78075/2011), EC | EGI-INSPIRE (261323)

    With the increasingly rapid growth of data in life sciences we are witnessing a major transition in the way research is conducted, from hypothesis-driven studies to data-driven simulations of whole systems. Such approaches necessitate the use of large-scale computationa...

  • Open Access English
    Authors: 
    Nawaz, R; Thompson, P; Ananiadou, S;
    Publisher: BioMed Central
    Country: United Kingdom
    Project: UKRI | From data to knowledge / ... (BB/F006039/1)

    Abstract Background Negation occurs frequently in scientific literature, especially in biomedical literature. It has previously been reported that around 13% of sentences found in biomedical research articles contain negation. Historically, the main motivation for ident...

  • Open Access English
    Authors: 
    Barker, Elton; Bouzarovski, Stefan; Pelling, Chris; Isaksen, Leif;
    Country: United Kingdom
    Project: UKRI | Network, Relation, Flow: ... (AH/F019459/1)

    HESTIA (the Herodotus Encoded Space-Text-Imaging Archive) employs the latest digital technology to develop an innovative methodology to the study of spatial data in Herodotus' Histories. Using a digital text of Herodotus, freely available from the Perseus on-line librar...

  • Open Access English
    Authors: 
    Amelie Dorn; Eveline Wandl-Vogt; Davor Davidović; Roberto Barbera;
    Country: Croatia
    Project: EC | EOSC-hub (777536), EC | EGI-Engage (654142)

    The rapid development of new digital tools and infrastructures in recent years and their application to a variety of disciplines has transformed how we store, access and retrieve information available to us. This has also shaped the ways how knowledge in a diverse cultu...

  • Open Access
    Authors: 
    Thomas Lippincott; Laura Rimell; Karin Verspoor; Anna Korhonen;
    Publisher: Elsevier BV

    AbstractInformation about verb subcategorization frames (SCFs) is important to many tasks in natural language processing (NLP) and, in turn, text mining. Biomedicine has a need for high-quality SCF lexicons to support the extraction of information from the biomedical li...

  • Open Access English
    Authors: 
    Ananiadou, Sophia; Thompson, Paul; Nawaz, Raheel; McNaught, John; Kell, Douglas;
    Publisher: Oxford University Press
    Country: United Kingdom
    Project: WT , UKRI | Supporting Evidence-based... (MR/L01078X/1)

    The assessment of genome function requires a mapping between genome-derived entities and biochemical reactions, and the biomedical literature represents a rich source of information about reactions between biological components. However, the increasingly rapid growth in...

  • Open Access
    Authors: 
    Jennifer Edmond; Natasa Bulatovic; Alexander O'Connor;
    Publisher: Japanese Association for Digital Humanities
    Project: EC | CENDARI (284432), SFI | Centre for Next Generatio... (12/CE/I2267)